| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1823 |
|---|
| Symbol | |
|---|
| ID | 6781812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2115998 |
|---|
| End bp | 2117365 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642767815 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_002138634 |
|---|
| Protein GI | 197118207 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGGA CTGTCGTCCT TAACGTAGTA GGGCTTACCC GGGCGCTCAT TGGCGACGGC
ACGCCGCGCC TGCGGGAGCT TCTCGCTGCA AGCGCCGATA TAAAAAGCAT AACGCCTGCC
GTCACCTGCT CGGTGCAATC CACCTACCTG ACCGGAAAGC TCCCTGCCGG GCACGGCATC
GTCGGCAACG GCTGGTACTT CCGCGATCTG GGGGAGGTCT TCTTCTGGCG CCAGTCGAAC
CGTCTGGTCC AGGGGGAGAA GATCTGGCAC GAGGCGAAAA GACGCGATCC CTCCTTTAGC
TGCGCCAACA CCTTCTGGTG GTACAACATG GTGACCGACG TCGATTACGC GATCACCCCG
CGCCCCTTAT ACCTCGCCGA CGGCAGGAAA CTCCCCGATT GCTACAGCAT CCCCGCTGAC
CTTCGCCACC GCTTCAACTC CGAGTTCGGC CAGTTCCCAC TGTTCCAGTT CTGGGGGCCT
GCCACCTCCA TCGTCTCCAG CGACTGGATC GGCAAGGCCG CCATGTCCAT CGAGGAAACC
TATCGCCCGA CCCTGCAGCT CGTCTACCTG CCGCACCTCG ACTACTGCCT GCAGAAGCTG
GGGCCCGGGG GGGATATCTC CGCCGAGCTG GCAAAGGTCG ACCTTCTCTG CGGGCAGTTG
CTCGACTTCT TTCGCGGGCG CGGTTGCCGG GTGGTGGTGC TCTCCGAATA CGGCATCACG
GATGTGGAGC GCCCGGTGCA CCCGAACCGG GTGCTGCGCG AAGCGGGGCT CTTGTCGCTC
AAGGTCGACC GGGGGCGGGA ATACCTGGAT CCCGGTACCA GCCGCGCCTT CGCCGTTGCC
GACCACCAGG TGGCACACGT CTACGTCCGC GACCCGAACG ACCTCCCGGC GGTGCGCGCC
CTCTTTCAGG GAGTCCCCGG CGTAGAAGAG GTGCTGGACG GGGAGGGGAA GAAGAGGGCG
GGCCTTGATC ACGAGCGCTC GGGGGAACTG GTGCTCGTCT CCGATGCGAA GAGCTGGTTC
ACCTACTACT GGTGGCTCGA CGACGCGAGA GCTCCCGACT ACGCCCGCAC CGTCAACATT
CACGCGAAGC CCGGCTATGA CCCGTGCGAG CTCTTCCTCG ATCCCACCAT CAGGCTTCCC
AAAGTGAAGA TCGCGGCGAC GCTGGCAAAG AAGCTTCTAG GTTTCCGCTA CCTGATGGAC
GTGATACCGC TTGATGCCTC ACTGGTGCGA GGCTCCCACG GCCGGGTCAC CGACGATCCC
GCCGCCGGCC CCATCTTCAT GACCACGGAA CCGAAGCTCC TCGATGCGGG GAGCGTGGAC
GCGACCGAAG TCTACAATCT GCTGCTGCGC CATCTGGAGG CGGACTAA
|
|---|
| Protein sequence | MQRTVVLNVV GLTRALIGDG TPRLRELLAA SADIKSITPA VTCSVQSTYL TGKLPAGHGI
VGNGWYFRDL GEVFFWRQSN RLVQGEKIWH EAKRRDPSFS CANTFWWYNM VTDVDYAITP
RPLYLADGRK LPDCYSIPAD LRHRFNSEFG QFPLFQFWGP ATSIVSSDWI GKAAMSIEET
YRPTLQLVYL PHLDYCLQKL GPGGDISAEL AKVDLLCGQL LDFFRGRGCR VVVLSEYGIT
DVERPVHPNR VLREAGLLSL KVDRGREYLD PGTSRAFAVA DHQVAHVYVR DPNDLPAVRA
LFQGVPGVEE VLDGEGKKRA GLDHERSGEL VLVSDAKSWF TYYWWLDDAR APDYARTVNI
HAKPGYDPCE LFLDPTIRLP KVKIAATLAK KLLGFRYLMD VIPLDASLVR GSHGRVTDDP
AAGPIFMTTE PKLLDAGSVD ATEVYNLLLR HLEAD
|
|---|
| |