| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1767 |
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| Symbol | |
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| ID | 6781756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2035913 |
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| End bp | 2038561 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642767760 |
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| Product | PEP-CTERM system TPR-repeat lipoprotein |
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| Protein accession | YP_002138579 |
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| Protein GI | 197118152 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGA AGTTTTGTCT CGTGTTGGTC ATCCTGCTCA CCTGTGCTGG ATGCAGCAGT
AAGACGAAAG AGTCTCTCTA TAACGAGGGA AAGCAACAGT TGGAGGCTTC TAATCCTGGC
GCTGCCGTCG TCTTCTTCAA GAACGCGCTG GAAAAGGATG GGAATTATCT GGAGGCACGT
TTCCAGTTAG CCAAGGCATA TGCGGCCCTT GGAAAGAACG AGCAGGCGGA AAAGGAATTC
ACCAAAGTCC TGACCCAGAA TCCGACTAGG GACGAGGTAC TGCTGGAACT GGCTAAGCTG
AATAATGCTA GTGGGAAAGG TGCCCAAGGT TTCAGCTATG CCACGCAATA CCTCGCAAAA
CATCCAGGGG CGGTTGATGG TCTCGAGGCT GCGGGGATTT CCTGTCTTGT CAGTAAAAAG
CACCAGGAAG CGCGTGAATA CTTTACTCAG GCTCTCAAAG TCGATCCTTC CCGCAGCGCC
ACAAAGCTGG AGCTTGCGTC GTTAGATATG GCCACAGGTG ATACTGAGAG GGCCAAGGCT
CTGCTCAATG AAGTGATCCT GGCGGAACAG AAAAATTTCA AGGCGCTCTA TATGCTGGCA
GCCATAGAGA ACAATTCGGG CCACGGCGAT AAGGCTGCCG TTCTGTATCA AAAAATATTG
CAACTGGATC AGAATCAGGT TCTTGCTCTG TATAAACTAG GGCTGCTGTA TTTGGAAAGG
GGTGAAGTGG ACAAGGCCGA TCAAAGAGCC GACCAAATGA TCAAGGCCTT CCCAAAAAAA
GGTGATGGTT ACCGTCTTAA AGGGCTGGCC GCCTTTTACC GCAAAAGATT CGACGACGCC
ATTACTTCGC TGCAGCAGTC TGTGAAGCTC TCACCGACCC TTGAGGCATA TCATTTCTTG
GGACTTAGCT ACTACAGCAA AGGCGAGTTG GAGAACGCCC TGAGCCAGTT CCGCGTGGTG
TTGGACCGGG TGCCTGAAGC TCGCAAGTCT AGGCTCATGA CTGCGCAGAC ACTATTGGCG
CAAAAGCGGA CTGAGGACGG CATAGCCGAG ATCAAGAAGG TTTTGGCCTC CGACGACAAC
GACGCTGTGG CCCACAACCT TTTGGGCGGG GCCTACATGT CACAGGGACT CTTCGAGGAG
GGGATGCGCG AGCTGAACCT GGCCACAAAG CTCGATCCCA AGATGGTCAA CGCCCACCTC
AAGAAGGGCG CCTTTTATTT TAGTAAGGGG AGGTATACCG AAGGAGAGAC AGAGCTTGCC
ACCGCCGTTC AAGCCGCTCC CGACGCCCAA AACAGCCGGC TTTTGCTTGC CTCCTACTAC
CAGAGCCAAA AAAAGCCGGC GAAGGCGCTC TCGACGCTTA AATCGGGACT CAAAGGGGGC
AAAGGCGATG CCCCGCTTTA CAACGCTATC GCTTCGCTGC AGTTCTCTGG GGGGAACAAA
GCCGAGGGGA TTAAGACTCT GGAGCAGGCC AAGCGCGTTG ACCCAGGCTT TGCGGCGACC
TACCAGAACC TTGCCGGCGT TTACGCCGCA ACCGGAGATT ATCCCCGCGC GATGGCGGAG
CTTAACCAGT TGCTCGCCAG GGATGCCGGC AACCTGCGCG CTCTGCTCGG CCTGGCCGCC
CTGAGCGAAA TCAGTGGCAA AGAGTCGGAC GCAGTCGCCT ATTACCAGAA AGCTACCCAG
ACCAAGGCGC CGGAAGCGTT CCTGGCCCTG GCTGGTTACC ATCAGAAAAA AGGGAATGTG
GCGAAGGCCA TAGGCGTTTT GGACGAGGAG ATCAAAATAG ATCCTCGCGC CATTTCGGCG
CTAGAAGCAA AAGGGCGCAT TCTGGCGTCG CAGAAGGAGT ACCAGAAGGC CCTAAAGGTA
TTCGACCAGG TCGAGGCCCT TAACGAGGAG CGTGGCGTTG CACTCAAGAT AGGCGCCTAT
GTGGCGATGA ACGATTCTTC CAAGGCCGTC GAGCAGGCAG GTCGTCTCAT CGCGAAACGT
CCCGGTTCCA GCCAGGGGTA CCTGCTCCTC GCCACGGTCC ACCAGAGTCT CAGAAATATC
CCTGCCGCTA TCAACGAGGT GAACAAGGCA ATACGCGCCG ACGGCAAGAG CGTGGAGGCC
CGCATCGCCC TGGGGAACCT CTACCAAGGC ACGAAGGAGT ACGACAAGGC GCTTGCCTCT
TACCAATATG CGCAGAGGAT GAATCCTGAT TCCGTCGCCG CCCAGTTCGC CATCGGCGCT
CTTTATGACA GTACCGGTAA AAAGAATCAG GCGGCGGATG CATACCGTGC GGTCCTGCAG
AAAAATGACA GATATGTCCC GGCCCTCAAC AACCTTGCCT ACCTCTGTGC CGATGGGTAC
GGGAGCAAGG AAGAAGCGCT TCGGCTGGCG ATCAGTGCTT TCAAGCAGCA GCCTGGCAAT
CCCGGCGTCA TGGACACCGT CGGCTATGCA CTGGCCAAGA ATGGCCGCAG TGCTGACGCG
GTGAAGGTTA TGGAACGGGC CGTCGCGCTG CTTCCCAACG ACCCGACCGT GCGCTACCAC
CTAGGACTTG CCTACTATTT GGCCGGGGAC AGGGCGAGGA GCGAGCAGGC GCTGCAAAAA
TCCCTTTCAC TGGGGCAGTC GCCGGACACC AAGGCGGCGC AGACGCTCCT GGCGGAGTTG
AAGAGGTAA
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| Protein sequence | MMKKFCLVLV ILLTCAGCSS KTKESLYNEG KQQLEASNPG AAVVFFKNAL EKDGNYLEAR
FQLAKAYAAL GKNEQAEKEF TKVLTQNPTR DEVLLELAKL NNASGKGAQG FSYATQYLAK
HPGAVDGLEA AGISCLVSKK HQEAREYFTQ ALKVDPSRSA TKLELASLDM ATGDTERAKA
LLNEVILAEQ KNFKALYMLA AIENNSGHGD KAAVLYQKIL QLDQNQVLAL YKLGLLYLER
GEVDKADQRA DQMIKAFPKK GDGYRLKGLA AFYRKRFDDA ITSLQQSVKL SPTLEAYHFL
GLSYYSKGEL ENALSQFRVV LDRVPEARKS RLMTAQTLLA QKRTEDGIAE IKKVLASDDN
DAVAHNLLGG AYMSQGLFEE GMRELNLATK LDPKMVNAHL KKGAFYFSKG RYTEGETELA
TAVQAAPDAQ NSRLLLASYY QSQKKPAKAL STLKSGLKGG KGDAPLYNAI ASLQFSGGNK
AEGIKTLEQA KRVDPGFAAT YQNLAGVYAA TGDYPRAMAE LNQLLARDAG NLRALLGLAA
LSEISGKESD AVAYYQKATQ TKAPEAFLAL AGYHQKKGNV AKAIGVLDEE IKIDPRAISA
LEAKGRILAS QKEYQKALKV FDQVEALNEE RGVALKIGAY VAMNDSSKAV EQAGRLIAKR
PGSSQGYLLL ATVHQSLRNI PAAINEVNKA IRADGKSVEA RIALGNLYQG TKEYDKALAS
YQYAQRMNPD SVAAQFAIGA LYDSTGKKNQ AADAYRAVLQ KNDRYVPALN NLAYLCADGY
GSKEEALRLA ISAFKQQPGN PGVMDTVGYA LAKNGRSADA VKVMERAVAL LPNDPTVRYH
LGLAYYLAGD RARSEQALQK SLSLGQSPDT KAAQTLLAEL KR
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