| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1729 |
|---|
| Symbol | |
|---|
| ID | 6781717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1993212 |
|---|
| End bp | 1994009 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642767721 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_002138541 |
|---|
| Protein GI | 197118114 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCT CTAAAGGGAC ATCGGCGGAG GCGCCCCTTC TGGAGGTGCG CGGGGTGACC
CTGCAGTACA CCACGCGCGA GCAACGGGTG ACCGCCACCT GGAGGGTCGA TTTCGATGCC
TGGGCCGGCG AGCGCCTGGT GCTCCTGGGC CCTTCCGGCT GCGGCAAGTC GACGCTTTTG
AAGGCGGTCG GCGGCTACCT GAAGCCGGTC GAGGGGGAGG TGCAGTTCCG CGGCAAGCAG
GTGCACGGCC CCGGGCCGGA CCGGGGGATG GTGTTCCAGG AGTTCGACCA GCTCCTCCCC
TGGAAAACGG TGAAGCAAAA CGTAGCCTTC GCCCTGCAGG AGGGAAGGGG AGTCCCCCGC
CGCGAGGCGG AGGAGCAGGC ACTCCACTTC ATCGCCAAGG TGAAGCTTTC CCGCTTCGCC
GACGCCTACC CGCATACCCT CTCCGGAGGG ATGAAACAGC GGGTCGCCAT CGCCCGCTGC
CTGGCGACCC GCCCCGAGCT GATCCTGATG GACGAGCCGT TCGCGGCACT CGACGCGCTT
ACCCGGCAGC AGATGCAGGA CGAGCTCCTG GAGTTGTGGC AGGAAAGCCC CTTCGCCATG
CTCTTCGTCA CCCACTCCAT CGACGAGGCG GTACGGCTGG GCCATCGCGT CATCCTCCTC
TCGCCCCACC CGGGACGGGT CAAGGAGGTG CTCGCCCTGG ACGGGAAGGG GGAGCTTGGG
CCGGTGCAAA GCGGGGCCGA GCTGCAGGAG CGGATCCACC GCTCCCTTTT CGAGACTGCC
TGCGACTATT CGATCTAG
|
|---|
| Protein sequence | MASSKGTSAE APLLEVRGVT LQYTTREQRV TATWRVDFDA WAGERLVLLG PSGCGKSTLL
KAVGGYLKPV EGEVQFRGKQ VHGPGPDRGM VFQEFDQLLP WKTVKQNVAF ALQEGRGVPR
REAEEQALHF IAKVKLSRFA DAYPHTLSGG MKQRVAIARC LATRPELILM DEPFAALDAL
TRQQMQDELL ELWQESPFAM LFVTHSIDEA VRLGHRVILL SPHPGRVKEV LALDGKGELG
PVQSGAELQE RIHRSLFETA CDYSI
|
|---|
| |