Gene Gbem_1696 details

Gene Information

• Locus tag: Gbem_1696
• ID: 6781684
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1961471
• End bp: 1962031
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 642767689
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_002138509
• Protein GI: 197118082
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.426925
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTTTG AAGAGATCTA TCAGGAGTTC CAGCCCAAGA TAACCCGTTA TCTCTGCAGT 
TTCATGTCCG AGGAAGAAGC GCTCGAAGTG AGCCAGGCGG TTTTCCTGAA GGTGAGCCAA 
TCCCTCGAAA GCTTCAGGGC GGAATCCTCC CTCTCCACCT GGATCTACCG GATCGCCACC 
AACGCCGCGC ACGACCACGC CTCTTTGTCC ATGACCAAGC AAAGGCGGGC TGAGCAACTG 
CTCGACGAGG ACCAGTCCCT GGACGATTTC GTGCGCGAGG ACGACCCGGA GACCGACTGG 
GAGTACATCC GGAGCGAGAT GGGGTGCTGT ATCCGCGGGA TGGTGGACGG CCTGCCGGAA 
AAGCTCCGCG AGGTCCTGGT CTTGAGCGAG TTCGAGGGAC TTTCCAATGC CGAGATTGCA 
GATGTTTTGA AGGCGAGTCT CGACACCGTG AAGATCCGGC TCCACCGGGC GCGGAAGGCC 
TTGCGCGAGG CGATGGGAGC CGGGTGCGAC TTCTACCGCG ACGAGCGCAA CCAACTGATG 
TGCGACCGAA AGGCGCAGTA A 

 

Protein sequence

MTFEEIYQEF QPKITRYLCS FMSEEEALEV SQAVFLKVSQ SLESFRAESS LSTWIYRIAT 
NAAHDHASLS MTKQRRAEQL LDEDQSLDDF VREDDPETDW EYIRSEMGCC IRGMVDGLPE 
KLREVLVLSE FEGLSNAEIA DVLKASLDTV KIRLHRARKA LREAMGAGCD FYRDERNQLM 
CDRKAQ