Gene Gbem_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1681 
Symbol 
ID6781669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1943051 
End bp1945087 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content66% 
IMG OID642767674 
Productglycogen debranching enzyme 
Protein accessionYP_002138494 
Protein GI197118067 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID[TIGR01561] glycogen debranching enzyme, archaeal type, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.132529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAG TGACACGCGA CTTCCATTTC GACCGGCATG ACGAGAAGAC CAAGACGCGG 
CAGCTCCTGG AGCAGGAGTG GCTTCTCACC AACGGCCTGG GAGGCTACGC CTCCGGCACC
GTCTGCGGCG CCCTCACCCG CCGCTATCAC GGGCTTCTCA TCGCAGCCTA TCCCTCGCCG
CTTGGGCGCA TGGTGATGCT GAACCGGCTC ACCGAGTCGA TCCGCTTCCC CGACGGGAGC
ACGGTCCGCT TCGGAGGCGA CCAGAGGGAG GGGGGACTCG ATTACGAGGG GATCGAGTAC
CTGACCGGGT TCCGCCTGGA AGACGGGCTC CCGGTCTGGC GCTACGAGTT CATGGGGAGC
GTGATCGAGA AGCAGCTGGT AATGGTGCAC AAGCAGAACA CGGTGCACCT GATCTACCGG
CTCCTCTCCG GCGAGCAGAA GGTGAGGCTC AAACTGCAGC CCTATCTGCA GTTCCGCCCG
CACGACGCCT CGGTGGACCA GGTGACCGAC GACCCGTACA TGTTCACCGC GGTGCAAAAC
CGCTACCAGA TCTCCACTGG AAGCCATGCG CCGCAGTTAA GGCTCGTGAT CAACGGGGGA
CGCGGCAACT TTACCCTGGA GGAGAAGCAG AGCACCGACA TCTTCTACGA CGTGGAAAAC
GCCCGCGGCT ACGACGCCCT GGGAACGCTC TGGACCGCAG GCTACTTCGC GGTCGACCTG
GGGATGGATC AGGAGGCGGC GCTGACCGCC TCCACGGAAA CCTGGGAAAC CCTGGCCGCC
CTCCCTCCCG AGGCGGCGCT CGCCATGGAA AGGGAGCGGC GCCGGCTTAT CCTGGCCGCG
GCGGACCCCA GGGCCCGCCA GGGGCTCGCG GCAGAGCTCG TCCTTGCCAC GGACCAGTTC
ATCATCACCC CGGCCGGCAG GCACAAGGAC AGCGTGCGCG CTCACGCCAT GGGGGACGAA
GTCTGCACCG TGATCGCCGG CTACCACTGG TTCACCGACT GGGGACGCGA CACCATGATC
TCGCTGGAGG GGCTCACCCT TGCCACCGGG CGCCACATGG AGGCGGGATG GATCCTTAGG
ACCTTCGCCC ACTACGTGAG AAACGGGCTG ATACCGAACC TCTTCCCGGA GGGGCACAAC
GACGGGCTCT ACCACACCGC CGACGCGAGC CTCTGGTTCT TCCACGCCGT CAACAGGTAT
CTGCAGCACA CCGGGGACGA CGCGACGCTG CAGTTGATCA TGCCCCAGCT GCGGCATATC
ATCGACAAGC ACCTCTCCGG CACCAGCTTC GGCATCAGGG TGGACCCAAG CGACGGGCTA
CTCACGCAGG GGGCCGAGGG GTACCAGCTC ACCTGGATGG ACGCCAAGGT AGGGGACTGG
GTGGTGACCC CGCGCCGGGG GAAGGCGGTG GAGCTGAACG CCCTCTGGTA CAACGCGCTC
AGGTTGATGC AGCAGTGGAC CGAGCAAAAC GACCCCGCCT ACTCGCGCCA GTTGGGCTCC
TTTGCCGACC AGACCTGCCG CTCCTTCAAC AGCCGCTTCT GGTATGCCGA GGGGGGCTAC
CTGTACGACG TGGTGGACGG CGAATTGGGG GACGACAGCG CCTGCCGCCC CAACCAGCTC
TTCGCCATCT CGCTCGAACA CTCGGTGCTG GAGCGTGACA AGTGGTCCCC GGTGCTGGAG
ACGGTGAGAA CAAGGCTGCT CACCCCGGTC GGGCTCCGCA CGCTCGCCCC CGGGCACCCC
GACTACAAAC CTACCTACCA CGGCGACCTG AGGGCCCGCG ACGCCGCCTA CCACCAGGGA
ACCGTCTGGC CTTGGCTGAT CGGGACCTTC GTCGACTCCT GGCTGAAGCT CTACCCCGAC
CAGGTCCAGA CCGCGCACAG CTTCCTGGAC GGGCTGGCGC GCCAGATGAA CCACCAGTGC
ATAGGCTCCA TCAGCGAGAT CTTCGACGCG GAAAAGCCCT ACCACCCCAA GGGGTGCATC
GCCCAGGCCT GGAGTGTCGC CGAGATGCTC AGGTGCTGGT TGAAGACCTC GCCCTGA
 
Protein sequence
MTTVTRDFHF DRHDEKTKTR QLLEQEWLLT NGLGGYASGT VCGALTRRYH GLLIAAYPSP 
LGRMVMLNRL TESIRFPDGS TVRFGGDQRE GGLDYEGIEY LTGFRLEDGL PVWRYEFMGS
VIEKQLVMVH KQNTVHLIYR LLSGEQKVRL KLQPYLQFRP HDASVDQVTD DPYMFTAVQN
RYQISTGSHA PQLRLVINGG RGNFTLEEKQ STDIFYDVEN ARGYDALGTL WTAGYFAVDL
GMDQEAALTA STETWETLAA LPPEAALAME RERRRLILAA ADPRARQGLA AELVLATDQF
IITPAGRHKD SVRAHAMGDE VCTVIAGYHW FTDWGRDTMI SLEGLTLATG RHMEAGWILR
TFAHYVRNGL IPNLFPEGHN DGLYHTADAS LWFFHAVNRY LQHTGDDATL QLIMPQLRHI
IDKHLSGTSF GIRVDPSDGL LTQGAEGYQL TWMDAKVGDW VVTPRRGKAV ELNALWYNAL
RLMQQWTEQN DPAYSRQLGS FADQTCRSFN SRFWYAEGGY LYDVVDGELG DDSACRPNQL
FAISLEHSVL ERDKWSPVLE TVRTRLLTPV GLRTLAPGHP DYKPTYHGDL RARDAAYHQG
TVWPWLIGTF VDSWLKLYPD QVQTAHSFLD GLARQMNHQC IGSISEIFDA EKPYHPKGCI
AQAWSVAEML RCWLKTSP