Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1681 |
Symbol | |
ID | 6781669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 1943051 |
End bp | 1945087 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642767674 |
Product | glycogen debranching enzyme |
Protein accession | YP_002138494 |
Protein GI | 197118067 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.132529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAG TGACACGCGA CTTCCATTTC GACCGGCATG ACGAGAAGAC CAAGACGCGG CAGCTCCTGG AGCAGGAGTG GCTTCTCACC AACGGCCTGG GAGGCTACGC CTCCGGCACC GTCTGCGGCG CCCTCACCCG CCGCTATCAC GGGCTTCTCA TCGCAGCCTA TCCCTCGCCG CTTGGGCGCA TGGTGATGCT GAACCGGCTC ACCGAGTCGA TCCGCTTCCC CGACGGGAGC ACGGTCCGCT TCGGAGGCGA CCAGAGGGAG GGGGGACTCG ATTACGAGGG GATCGAGTAC CTGACCGGGT TCCGCCTGGA AGACGGGCTC CCGGTCTGGC GCTACGAGTT CATGGGGAGC GTGATCGAGA AGCAGCTGGT AATGGTGCAC AAGCAGAACA CGGTGCACCT GATCTACCGG CTCCTCTCCG GCGAGCAGAA GGTGAGGCTC AAACTGCAGC CCTATCTGCA GTTCCGCCCG CACGACGCCT CGGTGGACCA GGTGACCGAC GACCCGTACA TGTTCACCGC GGTGCAAAAC CGCTACCAGA TCTCCACTGG AAGCCATGCG CCGCAGTTAA GGCTCGTGAT CAACGGGGGA CGCGGCAACT TTACCCTGGA GGAGAAGCAG AGCACCGACA TCTTCTACGA CGTGGAAAAC GCCCGCGGCT ACGACGCCCT GGGAACGCTC TGGACCGCAG GCTACTTCGC GGTCGACCTG GGGATGGATC AGGAGGCGGC GCTGACCGCC TCCACGGAAA CCTGGGAAAC CCTGGCCGCC CTCCCTCCCG AGGCGGCGCT CGCCATGGAA AGGGAGCGGC GCCGGCTTAT CCTGGCCGCG GCGGACCCCA GGGCCCGCCA GGGGCTCGCG GCAGAGCTCG TCCTTGCCAC GGACCAGTTC ATCATCACCC CGGCCGGCAG GCACAAGGAC AGCGTGCGCG CTCACGCCAT GGGGGACGAA GTCTGCACCG TGATCGCCGG CTACCACTGG TTCACCGACT GGGGACGCGA CACCATGATC TCGCTGGAGG GGCTCACCCT TGCCACCGGG CGCCACATGG AGGCGGGATG GATCCTTAGG ACCTTCGCCC ACTACGTGAG AAACGGGCTG ATACCGAACC TCTTCCCGGA GGGGCACAAC GACGGGCTCT ACCACACCGC CGACGCGAGC CTCTGGTTCT TCCACGCCGT CAACAGGTAT CTGCAGCACA CCGGGGACGA CGCGACGCTG CAGTTGATCA TGCCCCAGCT GCGGCATATC ATCGACAAGC ACCTCTCCGG CACCAGCTTC GGCATCAGGG TGGACCCAAG CGACGGGCTA CTCACGCAGG GGGCCGAGGG GTACCAGCTC ACCTGGATGG ACGCCAAGGT AGGGGACTGG GTGGTGACCC CGCGCCGGGG GAAGGCGGTG GAGCTGAACG CCCTCTGGTA CAACGCGCTC AGGTTGATGC AGCAGTGGAC CGAGCAAAAC GACCCCGCCT ACTCGCGCCA GTTGGGCTCC TTTGCCGACC AGACCTGCCG CTCCTTCAAC AGCCGCTTCT GGTATGCCGA GGGGGGCTAC CTGTACGACG TGGTGGACGG CGAATTGGGG GACGACAGCG CCTGCCGCCC CAACCAGCTC TTCGCCATCT CGCTCGAACA CTCGGTGCTG GAGCGTGACA AGTGGTCCCC GGTGCTGGAG ACGGTGAGAA CAAGGCTGCT CACCCCGGTC GGGCTCCGCA CGCTCGCCCC CGGGCACCCC GACTACAAAC CTACCTACCA CGGCGACCTG AGGGCCCGCG ACGCCGCCTA CCACCAGGGA ACCGTCTGGC CTTGGCTGAT CGGGACCTTC GTCGACTCCT GGCTGAAGCT CTACCCCGAC CAGGTCCAGA CCGCGCACAG CTTCCTGGAC GGGCTGGCGC GCCAGATGAA CCACCAGTGC ATAGGCTCCA TCAGCGAGAT CTTCGACGCG GAAAAGCCCT ACCACCCCAA GGGGTGCATC GCCCAGGCCT GGAGTGTCGC CGAGATGCTC AGGTGCTGGT TGAAGACCTC GCCCTGA
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Protein sequence | MTTVTRDFHF DRHDEKTKTR QLLEQEWLLT NGLGGYASGT VCGALTRRYH GLLIAAYPSP LGRMVMLNRL TESIRFPDGS TVRFGGDQRE GGLDYEGIEY LTGFRLEDGL PVWRYEFMGS VIEKQLVMVH KQNTVHLIYR LLSGEQKVRL KLQPYLQFRP HDASVDQVTD DPYMFTAVQN RYQISTGSHA PQLRLVINGG RGNFTLEEKQ STDIFYDVEN ARGYDALGTL WTAGYFAVDL GMDQEAALTA STETWETLAA LPPEAALAME RERRRLILAA ADPRARQGLA AELVLATDQF IITPAGRHKD SVRAHAMGDE VCTVIAGYHW FTDWGRDTMI SLEGLTLATG RHMEAGWILR TFAHYVRNGL IPNLFPEGHN DGLYHTADAS LWFFHAVNRY LQHTGDDATL QLIMPQLRHI IDKHLSGTSF GIRVDPSDGL LTQGAEGYQL TWMDAKVGDW VVTPRRGKAV ELNALWYNAL RLMQQWTEQN DPAYSRQLGS FADQTCRSFN SRFWYAEGGY LYDVVDGELG DDSACRPNQL FAISLEHSVL ERDKWSPVLE TVRTRLLTPV GLRTLAPGHP DYKPTYHGDL RARDAAYHQG TVWPWLIGTF VDSWLKLYPD QVQTAHSFLD GLARQMNHQC IGSISEIFDA EKPYHPKGCI AQAWSVAEML RCWLKTSP
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