| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1658 |
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| Symbol | |
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| ID | 6781646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1925369 |
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| End bp | 1926121 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642767652 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002138472 |
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| Protein GI | 197118045 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGTC CGATACCGAT CATGCTGTCC TTCGTCCTGC TCTTTGCAGC GGGATGCGCC
CTGAACCAGG GGGACAAGAA CCGGTCCATC TATCACTACC AGATGGGGCA GTCCTTTTAC
GCCGAGAACA ACTACACCGG CGCCCTCTTG GAGCTGAGCG AGGCCGAGAA GCTCACCCCG
AGGGATCCGG ACCTTTTGAA CCTTCTGGGG CTTACCTACT ACCGCAAGGG GCGCTACGAT
CTTGCCGAGG CGAAGTACCT GAAGGCGATC GACCACAAGG AGCGCTTCTC CGACGCCCGC
AACAACCTGG GGGTCAACTA CCTGGAGATG AAGCGCTGGG ACGACGCCAT CGAGCAGTTC
AAGCTGGTGC AGGACGACAT CTTCTACCAG GGGCAGGACG GCGTCGCCAT CAACCTAGGT
CTTGCCTATC TGGGCAAGGG GGAGTATCAG CAGGCCCTGA CCGTGCTGCG CAACGAGGTC
GGAAAAAACG GCAGCGACCC CCGCATCCGG CTCAACCTGG GCCGGGTCTA TTTCGCCCTT
CAAAAAAACG AACTAGCTGT CGAAGAGTAC CAAAAGGCCC TGCAGCTGAA CCGCTCCTAT
GCCTCCGCCT ATTACCACCT GGGGCTGGCA CAGATGAAGC TCAAAGACGC CGACGCAGCC
AAGAGCGCCT TTCAGGATGT GGTCCGTTTG GCCCCGGATT CGGAAATCGG GCAGCTCTCC
AGGGAGTACC TGGAACTGCT CAAGGTGAGG TAA
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| Protein sequence | MLRPIPIMLS FVLLFAAGCA LNQGDKNRSI YHYQMGQSFY AENNYTGALL ELSEAEKLTP
RDPDLLNLLG LTYYRKGRYD LAEAKYLKAI DHKERFSDAR NNLGVNYLEM KRWDDAIEQF
KLVQDDIFYQ GQDGVAINLG LAYLGKGEYQ QALTVLRNEV GKNGSDPRIR LNLGRVYFAL
QKNELAVEEY QKALQLNRSY ASAYYHLGLA QMKLKDADAA KSAFQDVVRL APDSEIGQLS
REYLELLKVR
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