| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1653 |
|---|
| Symbol | |
|---|
| ID | 6781641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1920474 |
|---|
| End bp | 1921025 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642767647 |
|---|
| Product | AMMECR1 domain protein |
|---|
| Protein accession | YP_002138467 |
|---|
| Protein GI | 197118040 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2078] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000224046 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAAA CACTCAACTC CGCAGACAAG AAACTCCTTT TGCACCTAGC CAGGGAAGCG
GTCACTGCCG CCGTTGAGAC CGGCAAAGTA AACGTGCGGC AGGTGACCGA GGCGCACCTG
CAGGCGACCA AAGGGTGCTT CGTCACCATC AAAAGGCTGG GTGCCCTCCG GGGGTGCATC
GGCAATTTCA GCTCGGAGAA ACCGCTTTAC CTGCTGGTGC AGGAGATGGC GGCCTCCGCG
GCCACCAGGG ACCCCCGCTT CTACCCCATG AAGGAGGAGG ACCTGGCCGA CTTCGAGCTG
GAGATATCGG TCATTTCGCC GCTGCAAAAG ATCGCGACGC CCGAGGAGGT CGTGGTGGGA
AGACATGGCT TGTACCTGGA AAAAAACTTC TCCCGCGGCG TGCTGCTGCC GCAGGTGGCG
GTGGAACAGG GCTGGGACAG GGAGACCTTC CTGGGCCAGA CCGCGCTGAA GGCGGGGCTT
AAGAAAGAGG ACTGGAAAGA AGGGGCGGAC CTGTACGTAT TCACCGCAGA GATCCTCGCC
GAGCGGCACT GA
|
|---|
| Protein sequence | MNETLNSADK KLLLHLAREA VTAAVETGKV NVRQVTEAHL QATKGCFVTI KRLGALRGCI
GNFSSEKPLY LLVQEMAASA ATRDPRFYPM KEEDLADFEL EISVISPLQK IATPEEVVVG
RHGLYLEKNF SRGVLLPQVA VEQGWDRETF LGQTALKAGL KKEDWKEGAD LYVFTAEILA
ERH
|
|---|
| |