| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1652 |
|---|
| Symbol | |
|---|
| ID | 6781640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1919042 |
|---|
| End bp | 1920367 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642767646 |
|---|
| Product | type I citrate synthase |
|---|
| Protein accession | YP_002138466 |
|---|
| Protein GI | 197118039 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01793] citrate (Si)-synthase, eukaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00794994 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAT TAAAAGAGAA ATTGTTTGAG AAGATCCAAG CCCACCGTCC CCGTATCACC
CGCCTGACCA AAGAGTTCGG CTCGGTGATC ATCGACAAGG TGGACATCGG TCAGTGCATC
GGCGGCGCCC GCGACATCCG TTCGCTCGTT ACCGACATCT CCTACCTCGA CCCGCAGGAA
GGGATCCGTT TCCGCGGCAA GACCATCCCC GAGACCTTCG AAGCGCTGCC GAAAGCGGCC
GGCTCCGAGT ACCCGACCGT CGAGTCTTTC TGGTACTTCC TTTTGACCGG CGAAGTTCCG
ACCGCGGCTC AGGTCTCTGC TGTCGAGGCT GAGTTCAAGA CCCGTCAGGT CGTACCCGAG
TACGTTTACA CTGCAGTCCG CGCGCTCCCG AAAGAGAGCC ACCCGATGGT CATGCTCTCC
GTCGGCATCA TGGCTATGCA GAAGGACTCC AAGTTCGCCG CATTCTACAG CGGCGGCAAG
TTCAACAAGA TGGACGCCTG GGAGTCCGTT TACGAGGACG CAAGCGACAT CGTCGCCCGT
ATCCCGGTAC TGGCCGCATT CATCTACAAC CTCAAATACC GCGGCGACAA GCAGATCGCC
ATCGATCCGA AGCTCGACAT GGGCGCAAAC TTCGCCCACA TGATCGGCCA GAGCGAGCAG
TACAAGGACG TGGCAAGGAT GTACTTCATC CTGCACTCCG ACCATGAGTC CGGCAACGTC
TCGGCTCACA CCACCCACCT GGTGCACTCC GCTCTCTCCG ACCCCTACTA CGCATACTCC
GCAGGCCTCA ACGGCCTGGC AGGCCCGCTG CACGGCCTTG CCAACCAGGA AGTGCTCGGC
TGGATCATGG AGTTCCAGAA GAAGCTCAAC GGCGCAGAGC CGACCAAAGA GAACGTCACC
AAGGCTCTGT GGGATACCCT CAACGCCGGC CAGGTCGTTC CGGGCTACGG CCACGCGGTT
CTCAGGAAAA CCGACCCGCG CTACACCGCT CAGCGCGAGT TCTGCCTCAA GACCCCGGGC
CTCAAGGACG ATCAGCTGTT CAAGCTGGTC GCCATGATCT TCGAGACCGC ACCGGGCGTC
CTCACCGAGC ACGGCAAGAC CAAGAACCCC TGGCCGAACG TCGACGCGCA GTCCGGCGTC
ATCCAGTGGT ACTACGGCCT CAAGGAGTGG GACTTCTACA CCGTTCTCTT CGGCGTAGGG
CGCGCCCTGG GCTGCATGGC GAACATCACC TGGGACCGCG GCCTCGGCTA CGCCATCGAG
CGTCCGAAGT CCGTCACCAC CGACATGCTC GAGAAGTGGG CTGCCGAGGG CGGCAGGAAG
ATGTAA
|
|---|
| Protein sequence | MTQLKEKLFE KIQAHRPRIT RLTKEFGSVI IDKVDIGQCI GGARDIRSLV TDISYLDPQE
GIRFRGKTIP ETFEALPKAA GSEYPTVESF WYFLLTGEVP TAAQVSAVEA EFKTRQVVPE
YVYTAVRALP KESHPMVMLS VGIMAMQKDS KFAAFYSGGK FNKMDAWESV YEDASDIVAR
IPVLAAFIYN LKYRGDKQIA IDPKLDMGAN FAHMIGQSEQ YKDVARMYFI LHSDHESGNV
SAHTTHLVHS ALSDPYYAYS AGLNGLAGPL HGLANQEVLG WIMEFQKKLN GAEPTKENVT
KALWDTLNAG QVVPGYGHAV LRKTDPRYTA QREFCLKTPG LKDDQLFKLV AMIFETAPGV
LTEHGKTKNP WPNVDAQSGV IQWYYGLKEW DFYTVLFGVG RALGCMANIT WDRGLGYAIE
RPKSVTTDML EKWAAEGGRK M
|
|---|
| |