| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1650 |
|---|
| Symbol | |
|---|
| ID | 6781638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1915787 |
|---|
| End bp | 1917436 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642767644 |
|---|
| Product | AMP-binding domain protein |
|---|
| Protein accession | YP_002138464 |
|---|
| Protein GI | 197118037 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAC AGATAGAGTT GACGGTCGGT GCGTTGCTGG ACGACATTGC CGGGAAATTC
CCCGACAACG AGGCGCTGAT CTACGTGGAG CGGGGATTGC GCTACAGCTA TCGTGAGTTC
AACGAGCGCT GCCGCCAGGT GGCGAAGGGC CTTTTGCGCA TGGGGGTCAA GAAGGGTGAC
CACCTCGCCA TCTGGGCCTA CAACGTTCCG GAATGGGTCG TGCTGCAGTT CGCCACCGCG
AAGATCGGCG CCGTGCTCGT CACCGTCAAC ACGAGCTACA AGTCCGCCGA GCTCGAGTAC
ATAATGAAGC AGTCCGATTC GAAATTCCTG TTCCTGGTGC AGGGGTTCAA GGACACCGAC
TATATCCGGA CCTTGGCCGC CGTGGTGCCG GAGCTTGCCG AAAGCGAGCC GGGAAAACTC
GAAAGCCGCG ACCTGCCGTT TTTGAAGCAC GTGGTTTTTC TTGGAGAAGG GGCCCCCGCG
GGGACCATCA ATTTCGAGAA GATCGTGGAG CTTGGGCGCG AGGTCCCGGA CGCGGAACTT
CACGCGGTGG AAAAGACCCT CTCGGTGCAC GACGTCATCA ACATGCAGTA CACCTCCGGC
ACCACCGGCT TCCCCAAAGG GGTCATGCTG ACCCACCACA ACTTGGTCAA CAACGGCTTC
AATATCGGCG AGTGCATGCG CTTTACCGAA AAGGACCGGC TCTGCATCCC GGTTCCCTTC
TTCCACTGCT TCGGCTGCGT CCTGGCCGTC ATGGCCTGCG TCACCCACGG CTCCACCATG
GTGCCGGTGG AGATCTTCGA TCCTTTGAAG GTGCTCCAGG CGGTGGAAAA GGAGCGCTGC
ACCGCGCTGC ACGGCGTCCC GACCATGTTC ATCGCCGAGC TTGAGCACCC CCGCTTCCCG
GAGTTCGATC TCACCTCGCT TAGGACCGGG ATCATGGCCG GCTCCAACTG CCCCATAGAG
GTGATGCGCC GGGTGATCCG GGACATGCAC GCCAGCGAGA TCACCATCGC CTACGGGCAG
ACCGAGTCCT CCCCGGTCAT CACCCAGACC CGCACCGACG ACCCGATCGA GCTGAAGGTC
TCCACGGTGG GGAGGGTGCT CCCCAACGTG GAGCTTAAAA TCGTGGACAT CGAGAGCGGC
GCCGAGCTTC CGCCGGGGAA GCAGGGGGAA CTCTGCACCC GCGGTTACCT GGTCATGAAG
GGGTACTACA AGATGCCGGA GGAAACAGCC AAGGCGATCG ACGCCGACGG CTGGCTTCAT
ACCGGAGACC TCGCGGTCAT GGACGAAAAC GGCTACTGCA AGATCACCGG CAGGATCAAG
AACATGATCA TCCGCGGCGG CGAGAACATC TATCCCCGCG AGATCGAGGA ATTCCTCTAC
ACCCACCCGA ATATCTCCGA CGTTCAGGTC TACGGTGTGC CGGACCGCAA ATACGGGGAG
CAGGTGATGG CGGCCGTGGT TCTGAAGCAG GGAAGCGAGA TGTCCGAGGC GGAGGTCAAG
GAGTTCTGCC GCGGCCGGAT CGCCAACTAC AAGATCCCGA AGTACGTCCG CTTCGTCGAC
TCCTATCCCA TGACCGCCAG CGGCAAGATC CAGAAGTTCA AGCTGCGGGA AATGGCGATA
CGCGAGCTGC AGCTTGAGGA AAATATCTGA
|
|---|
| Protein sequence | MSQQIELTVG ALLDDIAGKF PDNEALIYVE RGLRYSYREF NERCRQVAKG LLRMGVKKGD
HLAIWAYNVP EWVVLQFATA KIGAVLVTVN TSYKSAELEY IMKQSDSKFL FLVQGFKDTD
YIRTLAAVVP ELAESEPGKL ESRDLPFLKH VVFLGEGAPA GTINFEKIVE LGREVPDAEL
HAVEKTLSVH DVINMQYTSG TTGFPKGVML THHNLVNNGF NIGECMRFTE KDRLCIPVPF
FHCFGCVLAV MACVTHGSTM VPVEIFDPLK VLQAVEKERC TALHGVPTMF IAELEHPRFP
EFDLTSLRTG IMAGSNCPIE VMRRVIRDMH ASEITIAYGQ TESSPVITQT RTDDPIELKV
STVGRVLPNV ELKIVDIESG AELPPGKQGE LCTRGYLVMK GYYKMPEETA KAIDADGWLH
TGDLAVMDEN GYCKITGRIK NMIIRGGENI YPREIEEFLY THPNISDVQV YGVPDRKYGE
QVMAAVVLKQ GSEMSEAEVK EFCRGRIANY KIPKYVRFVD SYPMTASGKI QKFKLREMAI
RELQLEENI
|
|---|
| |