Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1646 |
Symbol | |
ID | 6781634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 1911138 |
End bp | 1912514 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642767640 |
Product | carboxyl-terminal protease |
Protein accession | YP_002138460 |
Protein GI | 197118033 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000394964 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA AGGTTTTCGC CGCATTTGCC GTGATTTTTC TCCTCCTCTC GCTCGTCTTG ATGCTTCCCC TGATGGACCG GGAGGAGCGG GCCAAGAGAA GCGAGGCCGA GTACCTCGAG ATGTTCCGCG ACGTCGTCAA CATCGTCAAG CAAAGCTACG TGGACAAGGT CGACGACAAG AAGCTCATGG CCGTCGCCAT CAACGGGATG CTGGCGACGC TCGACCCACA CAGCAACTAT CTCCCAGCAA CCGACTATAC CGAAATGAAG GTGCACATGG CCGGTGCCTT CGGCGGCCTC GGGATCGAAC TGGAGATGCG CAACGGCAAG CTGATGGTGA ACGCCCCCAT CGAGGACACC CCCGCCTTCC GGGCCGGGAT CCAGTCCGGC GACCACATCT GGACCATCGA CGGTAAACCT ACCGCCGACC TCAACATCAA CCAGTGCGTA AGCCGCATGC GCGGAACCCC AGGAACCTCG GTAACCCTCG GCATACTGCG CGAGGGTAAG TCGTCCCCTC TCACCTTCCG CCTGGTGCGT GCCATCATCA AGACCAAGAG CCTGAAAGGG AGGCTCCTTG AGCCTGGGTA CGGCTATATC CGGATCGGCG AATTCCAGGA GCGCACCGGC GAGGACTTCG AAAAGGCACT GAAAACGCTT GCCGCCGATA ACGGCCAGCC GCTTTCTGGC CTCGTGCTGG ACCTCCGGTT CAACCCGGGC GGACTGGTGG ACCAGGCCTG CCGCGTCGCC AACCGCTTCA TCGGCGAGGG GCTTTCCTCA GGGGTCATCG TCACCACCAA AGGGCGCGAG GCAGCGATGG ATAGAAGCCT TACCGCGACC GTCGGCGACA AGGAGCCCCG CTACCCGATC GTGGTGCTCA TAAACGGCGG CAGCGCCAGC GCCTCCGAGA TCGTCGCCGG AGCGCTGCAG GACCACAAGA GGGCCGTCAT CATGGGGACC CAGAGCTTTG GCAAAGGAAG CGTCCAGTCG GTGATGACGC TCGACAACGG CGACGGCCTG AAGTTGACCA CAGCCCGCTA CTACACCCCC AGCGGGCGCT CCATCCAGGC CAAGGGAATC ACCCCCGACA TCGTGGTGGA GTTTGCCAAG CCCGCCCCCG CTAAAGACAA GCAAAAGGAT GCAAAGGAAT TGGAGATCCG CGAGCAGGAT CTGGACGGGC ACATGGACCA GGCTCCGGCG CCGCCGCGCC CGGCGTCCCC CGCGAAACCG CATTCGGCGC CCCCCGCGAA ACCGCAGCAA AAGCCGAGCA GCAAGGAGTT GAAAGAGCAG GACCTCCTTA AAGCCGACAA CCAACTGGCC CGGGCGCTCG ACCTTCTGAA GGGGGTCAAC CTGCTGAAAG CGAGCGGCCG GCGTTGA
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Protein sequence | MSKKVFAAFA VIFLLLSLVL MLPLMDREER AKRSEAEYLE MFRDVVNIVK QSYVDKVDDK KLMAVAINGM LATLDPHSNY LPATDYTEMK VHMAGAFGGL GIELEMRNGK LMVNAPIEDT PAFRAGIQSG DHIWTIDGKP TADLNINQCV SRMRGTPGTS VTLGILREGK SSPLTFRLVR AIIKTKSLKG RLLEPGYGYI RIGEFQERTG EDFEKALKTL AADNGQPLSG LVLDLRFNPG GLVDQACRVA NRFIGEGLSS GVIVTTKGRE AAMDRSLTAT VGDKEPRYPI VVLINGGSAS ASEIVAGALQ DHKRAVIMGT QSFGKGSVQS VMTLDNGDGL KLTTARYYTP SGRSIQAKGI TPDIVVEFAK PAPAKDKQKD AKELEIREQD LDGHMDQAPA PPRPASPAKP HSAPPAKPQQ KPSSKELKEQ DLLKADNQLA RALDLLKGVN LLKASGRR
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