Gene Gbem_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1626 
Symbol 
ID6781614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1886658 
End bp1887218 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content53% 
IMG OID642767620 
Productsugar transferase 
Protein accessionYP_002138440 
Protein GI197118013 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA CCTTCGATTT TGTGTTGTCT TTTTTGCTGC TTGCCTGTCT CGGTGTTCCA 
ATGCTTCTGA TCGCCCTGCT GGTGAAGCTG ACTTCGCCGG GGCCGGTTCT GTACTGGTCC
GATAGGGTGG GAAGGTGCAA CGTCATCTTT AGGATGCCAA AGTTCCGCAG CATGCGCGTC
GACACTCCTG CTGTTGCCAC CCACCTGCTC ACCAATCCGG ACCAGTTCCT TACACCGATC
GGGAAGTTCC TTAGGAAGTC TAGTTTGGAT GAACTGCCGC AACTTCTGAG TATACTGACG
GGGAACATGA GCTTCGTCGG CCCCCGGCCG GCGCTCTTCA ACCAGGATGA CCTCATCGAA
CTGAGGACCC GTAAGGGTGT TCATCTCATT ACCCCTGGCC TGACTGGCTG GGCCCAAGTG
AACGGCAGGG ATGAGCTTCT CATACCGGTC AAGGTCGAGT TCGATTCCTA CTACGTTCAA
AACAGCAGTT TCCTTTTCGA CCTTCGCATC ATCTTTCTTA CTTTGGTTAA GGTACTTAAA
ACAGATGGGG TGCAGCACTG A
 
Protein sequence
MKRTFDFVLS FLLLACLGVP MLLIALLVKL TSPGPVLYWS DRVGRCNVIF RMPKFRSMRV 
DTPAVATHLL TNPDQFLTPI GKFLRKSSLD ELPQLLSILT GNMSFVGPRP ALFNQDDLIE
LRTRKGVHLI TPGLTGWAQV NGRDELLIPV KVEFDSYYVQ NSSFLFDLRI IFLTLVKVLK
TDGVQH