| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1621 |
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| Symbol | |
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| ID | 6781609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1881157 |
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| End bp | 1882173 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642767615 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_002138435 |
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| Protein GI | 197118008 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCTG GCAAGACCCT GCTCATCACC GGCGGCACCG GATCCTTTGG GAACGCAGTG
CTACGACGCT TTCTGCACAC CGACATCAAA GAGATCCGCG TTTTCAGCCG CGACGAGAAA
AAGCAGGAGG ACATGCGCAT CGGGCTGAAC AACGGCAAGG TGAAGTTCTA TATCGGCGAC
GTGCGTGCCT TTGATGGTAT TAACGCTGCT TTGCATGGAG TCGACTTCGT GTTTCATGCC
GCGGCTCTTA AGCAGGTTCC TTCCTGCGAG TTTTACCCGA TGGAGGCGGT ACGGACCAAC
GTGCTGGGGA CCGAAAACGT CCTCAATGCC GCGCTGCAAA GCGGGGTGAA GAAGGTCATC
ACCCTCAGCA CCGATAAGGC GGTCTACCCC ATCAACGCCA TGGGTATCTC CAAAGCGATG
ATGGAGAAAC TCATGGTCGC CAAGGCGCGC ATGACCGACG TGAGCAGGAC GATATTTTCC
GGCACGCGCT ACGGCAACGT GATGGCTTCC CGTGGCTCCG TCATCCCGCT TTTCGTGAAG
CAGATAAAAG AGGGCAAGCC ACTCACCGTT ACCGATCCCA ATATGACCCG GTTCCTGATG
TCCCTTGACG ATGCTGTCGA CCTTGTCCTC TACGGTTTCA GCAATGCCAG GCAAGGGGAC
ATATTCGTGC AAAAGGCACC CGCCTCCACC ATACTGGACC TGGCAGTGGC GGTGAAGGAG
TTGTTCGACG CGAACAACGA AATCCGCATC ATCGGCACGA GGCACGGAGA GAAGTTGTAC
GAGACCCTGC TCACGCGCGA GGAACTTGCC AAGGCCGAAG ACATGGGTGA CTACTTCAGG
ATTCTTCCTG ATGACAGGGA CCTGAACTAC GGCAAGTACT TCACCGAAGG CGAGGAGAAG
GTGTCAACCA TCGACGACTA CAACTCCCAC AACACCCAGA GGTTGTCCGT GGCAGAGATC
AAGGAAAAGC TCTTGAAGCT CGACTACATT CGCGGCGAAC TGGAGGGGAG GGCATGA
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| Protein sequence | MFSGKTLLIT GGTGSFGNAV LRRFLHTDIK EIRVFSRDEK KQEDMRIGLN NGKVKFYIGD
VRAFDGINAA LHGVDFVFHA AALKQVPSCE FYPMEAVRTN VLGTENVLNA ALQSGVKKVI
TLSTDKAVYP INAMGISKAM MEKLMVAKAR MTDVSRTIFS GTRYGNVMAS RGSVIPLFVK
QIKEGKPLTV TDPNMTRFLM SLDDAVDLVL YGFSNARQGD IFVQKAPAST ILDLAVAVKE
LFDANNEIRI IGTRHGEKLY ETLLTREELA KAEDMGDYFR ILPDDRDLNY GKYFTEGEEK
VSTIDDYNSH NTQRLSVAEI KEKLLKLDYI RGELEGRA
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