| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1610 |
|---|
| Symbol | |
|---|
| ID | 6781598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1868483 |
|---|
| End bp | 1869586 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642767604 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_002138424 |
|---|
| Protein GI | 197117997 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.988475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGA GCATCCCATT TCTGAACCTC CGCTCCACCT ACGATGAGTT AAGCGCCGAG
ATCGATCAGG CCTACCATAG GGTCATGGAT TCCGGCTGGT ACATTTTGGG CAACGAGGTC
ACCCTGTTTG AGCAGGAGTT CGCCGCCTAC TGTGGCGCTG AACACTGCGT CGGCGTCGGT
AACGGTTTGG ATGCGTTGCA CCTGATCATG AGAGCGATGG GGATTGGGGA GGGGGACGAG
GTAATTGTTC CCGCTAACAC CTATATTGCC ACCATACTTG CTGTCATCTA CACGGGTGCG
ACCCCTGTGC TGGTCGAACC GTCGCTAAAT ACCTACACCT TGAACCCGGC GCTGGTGGAG
AAGGCGGTGA CGAGCCGCAC CAAAGCGATT CTTCCGGTGC ATCTCTATGG TTTTCCAGCG
GACATGGACC CCATCAACGC CATAGCCCGC GAACACAGTC TGAAGGTGAT CGAGGACGCG
GCTCAGGCTC ACGGCACTAG CTACCGCGGA CGGCGCGCCG GAACCCTCGG CGACGCAGCC
GGTTTCAGTT TCTATCCAGG CAAGAACCTC GGTGCCTTCG GCGACGGCGG CGCAGTCGTC
ACCAACGACG GCGAGATCGC CGACCGGGTG CGGGTCTTGC GAAACTACGG ATCGCGAGTC
AAGTACCAGA ACGAGACCAT TGGCTACAAC ACCCGGCTGG ACGAAATGCA CGCCGCAGTG
CTGCGAATCA AGCTGCGCAA GCTAGATGAG TGGAATGACA GGCGCAGGGC CCTTGCCGAC
TACTATCTGA ATGGGCTAAA AGGGCTCGAC CTCGTGCTGC CGGAGGTTCC CTCCTTCGGA
GAACATATCT GGCATCTTTT CGTAGTGAGG AGCGCCGACC GGGACAACCT GCAGAAGAAG
CTTGCCGCGG CTGGCATCGG CACCATGATC CATTACCCCA TCCCGCCACA TCTACAACCG
GCCTGCGCCT ACCTGGGCCT CTCCCAGGGG ACGTTTCCGA TCACTGAGGC CATCCATCGC
GAAGTGCTAA GCCTGCCCAT GGGGCCACAT CTCCTGCAGT CGGAAGTCCA AAGCGTCATT
GATACAGCGG GACGGTGCCT GTGA
|
|---|
| Protein sequence | MSLSIPFLNL RSTYDELSAE IDQAYHRVMD SGWYILGNEV TLFEQEFAAY CGAEHCVGVG
NGLDALHLIM RAMGIGEGDE VIVPANTYIA TILAVIYTGA TPVLVEPSLN TYTLNPALVE
KAVTSRTKAI LPVHLYGFPA DMDPINAIAR EHSLKVIEDA AQAHGTSYRG RRAGTLGDAA
GFSFYPGKNL GAFGDGGAVV TNDGEIADRV RVLRNYGSRV KYQNETIGYN TRLDEMHAAV
LRIKLRKLDE WNDRRRALAD YYLNGLKGLD LVLPEVPSFG EHIWHLFVVR SADRDNLQKK
LAAAGIGTMI HYPIPPHLQP ACAYLGLSQG TFPITEAIHR EVLSLPMGPH LLQSEVQSVI
DTAGRCL
|
|---|
| |