| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1604 |
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| Symbol | |
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| ID | 6781592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1859843 |
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| End bp | 1862701 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642767598 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_002138418 |
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| Protein GI | 197117991 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA TCCTGCTGTT CGCTGTTTTG CTCGCCTTCC TTTCCAACGC CATAGCCTTC
CCCGCCTCAC AACCCGAGGC TCAATATTCA TCATCTGGAA CTTCTGCCAA CGCCGGCATG
AAAGAGAACG GCTCCATCTT CGGCGCCTCG GACTATTTCA AGCTGCCGGA CCCCGAAGAT
GAGGCTGACA CCATCTCCAA ACCCCAGATG GACAAGGGGG AGAGGGATTC GCGGCGCCAG
CGCGCCCGCG GTGAGGATGT CGATACCTCA CGATACGATG ATCGCCAGGA ACAAAGTGCG
GATGAGATCT CCAGCGACGA CACCTACGAC AATTCCTACG ATAACTCTTT TGACAACTCC
TATGACAGCT CCTATGACAA CTCCTCTGAC AGCTCCTCTG ACAGGTCATA CGATAGCTCT
TACGAGAAAC GCTATGAAAA GCCGTACAAC GTCAATGACG GTGAGGCGCT CAAGGAAGAC
AAGGAGCCTA AGAAGGACAA GGACGGCAAG GAACTAAACG AAGAGAAGAA GCGTTCCGAT
ATTAAGACCG GCAAGGAGCG TGTGAAACGG AGCAAGGTCG CCAGAAAGAC CCGCCCGGGG
CAGCGCAAGG CGAAGGAGTT GTCCACCCTT GAACGCGCCA TGAGCGAAAA CCCGGTGACG
GCTGACAAGG CGAAGCCTGA GCCCTATGGC AATAAACAGC TGATCCAGTT CGGCTACAAC
TTCTTCAAGT CCAAGGAAGA TCCCTTCGCT TCACAGACAG ACGTTCCGGT CGGCCCCGAC
TACATCATCG GTGCGGGCGA CCGTCTGATC CTGACCGTAT GGGGAAGCCT CAACGGCACC
TACAAGCTCG ACGTTAGCCG CAGCGGAGAT ATCGTCATCC CCAAAGTGGG CGCTGTCAAA
GTCGGCGGAC AGAGCTACGG ACAGCTTCCT GCGCTGCTCA AAAACCACAT CGCTCGCATC
TACAAAGACT TCGAATTGAA CGTCAACATG GGGCAGCTCA GGCTGGTCAA GGTTTACGTG
GTGGGCGAAG TTGCCTCTCC CGGCGACTAC AACATAAGCT CCCTTTCCAC CCTCATCGGT
GCCCTTTCCG AGGCCGGCGG CCCCACCAAG AACGGCAGTC TCAGGAACAT CCAGATCAAC
AGGAACGGCA AGCTCCTCGA AACGGTGGAC CTCTACGATT TCTTCCTCAA AGGGGACAAA
GGGAAAGACA TCCGGCTGCA GCCGGGCGAC ACCGTGCTTG TCCCTGTGAT AGGGAAGGTA
GCGGGGGTCG CGGGCAACGT GCGCCGCCCG GGCATCTACG AGTTGAAGGG ACAAACGACG
CTGAAGGATC TGCTGGCGCT CGCCGGGGGG ATCAACTCCA TAGGCTACCT GCAGCGGGTC
CAGTTGTACC GGGTCCAGGC GCACGACAAG AAGGTCGTCA CCGACGTCAA CCTCGATGTA
ATCGGCAAGA CTTCCGAAGA TATCACCGCT GCAGTCCCGG TCCAGGACCT CGACTTGGTC
AAAGTACTCT CCATCGACCG GGTGCTGCGT GGCTACGTGC GCCTGGAAGG GCACGTGGTC
CGGCCTGGCG ATTACGCGCT GAAGCCGGGT ATGAAGATCA GCTCCCTGGT GCAGAAAGAT
AGCCTGCTCC CCGAGTACCA CGCGGCCACT GGCCAGATCA TCAGGCTTTT TGCCCCCGAC
CTGCACCCCG AGGTGGTCCC GTTCGACGTC TCCCGTGCCA TGGCGGGGGA GGCGGGGCAG
GACCTGGAAC TGAAGGAGTT CGACCGGGTG AAGATCTTCT CCAAGCGCGA AATGGAGGAG
GTCCCCGTGG TCAAGGTGAG CGGAGAGGTG AAGCGCCCCG GACCCGTCCG CTACATGGAG
AACATGACGG TGCGCGACCT GCTGACTCAG GCCGGCAACG TGAAGCTCTC AGCCTACCTG
AAGAACGCCG AAATCACCAG GATCAAGCGT ACCGGCGACG CCGTCACCTC GTTCACCATC
ACAGTGGATC TGGAAAAAGC CATGGCAGGC GGCGAAGCGA ACATCAAGCT GTCTCCTTTC
GACGAGCTGA CCGTACGGCG CATACCCAAC TGGGCCGAGG CGAAGGAGCG CTACGTAACG
CTCAAAGGGG AATTCGTTTT CCCGGGCACC TATCCCATCT CGAAAGGGGA GCGGCTCAGT
TCCGTCATTG CAAGAGCCGG CGGCTTCACC GATCGGGCCT ACCTCAAGGG GACTCGCTTT
ACCCGGGAGA GCGCCAGGAA ACTGCAGCAG CAGCGCATGG ACGAGTCGCT GGCCAAGGCA
CAGGAAAACA TCATCAAGCT CCAGACCAAC ATGTCGCAGA CAGCATCCTC CGCCGAGGAA
GTGGCCAGCT CGAAGACCAC CCTGGAAGGG CTGATGCAGA GCGTCGAGAT TCTGAAGCAG
AAGAAGGCCG AAGGGCGTGT GCTGATTGAG ATAGCCTCAC TGAAGGAGCT TGAGGGGAGC
AATTACGACG TCGAGTTGCA AGGCGGGGAC AAACTGAGCA TTCCTAGCGA CCCCGGCGGC
ATCAACGTAA TCGGTGACGT CTATAACCAG AACACCATCG TGGCGCAGAA GGGGCGTAGC
GTCGAGTGGT ATCTGAAACA GGTTGGTGGC GCGACCGCAG ATGCGGATAC CGACGGTATT
TATGTCGTGA AGGTGGACGG TTCGGTCACA AGCCAGGCCA ACTCCACGAA ATTCTTGTTC
TACAACTCCT TCTGGGGCAA GCCGCTTGAT TCCGGGGACA CCATCATCGT ACCAAGGCAG
TACGAGAAGA CCGCCTACCT TAGGAATATG AAGGACATTG CCACCATCAT AGGTAACATA
GCTGTAATGG CCGGTGTGTT GGTGGCTGCA GGCCTTTAG
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| Protein sequence | MKKILLFAVL LAFLSNAIAF PASQPEAQYS SSGTSANAGM KENGSIFGAS DYFKLPDPED
EADTISKPQM DKGERDSRRQ RARGEDVDTS RYDDRQEQSA DEISSDDTYD NSYDNSFDNS
YDSSYDNSSD SSSDRSYDSS YEKRYEKPYN VNDGEALKED KEPKKDKDGK ELNEEKKRSD
IKTGKERVKR SKVARKTRPG QRKAKELSTL ERAMSENPVT ADKAKPEPYG NKQLIQFGYN
FFKSKEDPFA SQTDVPVGPD YIIGAGDRLI LTVWGSLNGT YKLDVSRSGD IVIPKVGAVK
VGGQSYGQLP ALLKNHIARI YKDFELNVNM GQLRLVKVYV VGEVASPGDY NISSLSTLIG
ALSEAGGPTK NGSLRNIQIN RNGKLLETVD LYDFFLKGDK GKDIRLQPGD TVLVPVIGKV
AGVAGNVRRP GIYELKGQTT LKDLLALAGG INSIGYLQRV QLYRVQAHDK KVVTDVNLDV
IGKTSEDITA AVPVQDLDLV KVLSIDRVLR GYVRLEGHVV RPGDYALKPG MKISSLVQKD
SLLPEYHAAT GQIIRLFAPD LHPEVVPFDV SRAMAGEAGQ DLELKEFDRV KIFSKREMEE
VPVVKVSGEV KRPGPVRYME NMTVRDLLTQ AGNVKLSAYL KNAEITRIKR TGDAVTSFTI
TVDLEKAMAG GEANIKLSPF DELTVRRIPN WAEAKERYVT LKGEFVFPGT YPISKGERLS
SVIARAGGFT DRAYLKGTRF TRESARKLQQ QRMDESLAKA QENIIKLQTN MSQTASSAEE
VASSKTTLEG LMQSVEILKQ KKAEGRVLIE IASLKELEGS NYDVELQGGD KLSIPSDPGG
INVIGDVYNQ NTIVAQKGRS VEWYLKQVGG ATADADTDGI YVVKVDGSVT SQANSTKFLF
YNSFWGKPLD SGDTIIVPRQ YEKTAYLRNM KDIATIIGNI AVMAGVLVAA GL
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