| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1575 |
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| Symbol | |
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| ID | 6781563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1823437 |
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| End bp | 1825965 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767569 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002138389 |
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| Protein GI | 197117962 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACC ACTGGATAGA TTTCAAGAAC GCCGACGTAA TCCTCATCAT GGGCGCGAAC
CCCGCCGAGA ACCACCCGGT CGCCTTCCGC TGGATCCTGA AGGCGAAGGA GTCGGGGGCG
AAGGTCATCT GCGTCGATCC CCGCTTCACC CGCAGCGCCG CAAAGTCGGA CCTGTACGCG
CCGCTGCGCT CCGGAACCGA CATCGCCTTC CTGGGCGGGA TGATCAACCA CATCCTGCAG
AACAAGCTCT ACTTCGAGCA GTACGTGGCC GAGTACACCA ACGCCTCCTA TCTGGTGAGC
GGCGACTTCA AGCTCCCGGG AGAGCTGGAC GGCCTCTTCT CCGGGTACGA CCCGCAGAAG
CGGAGCTACG ACGTTAAAAG CTGGTCCTTC CAGAAGGAGG CCGACGACAG CATCAGGAAG
GACCCGACCC TGCAGGACCC GAACTGCGTG TTCCAGCTCC TGAAGAAGCA CTACAGCCGC
TACACCCCGG AGCTGGTCTC CAAGACCACG GGGACGCCCA AGGAAAAGCT CCTGGAGGTG
TACCAGCTCT ACGCCTCCAC CGGCAGGCCC GACCGCGCCG GCACCTCGCT TTACGCCATG
GGGTGGACCC AGCACACGGT CGGCACCCAG AACATCCGCA CCATGTCCAT CATCCAGCTC
TTGTTGGGGA ACATCGGCGT CGCCGGAGGC GGGGTGAACG CGCTGCGCGG CGAATCGAAC
GTGCAGGGAT CGACTGACCA GGGACTTTTG TTCCACATCC TCCCGGGCTA CATGCCGGTC
CCCTCGGCCG ACCTTCCCAC CACGGCTGCC TACATCGAAA AGCACACCCC GAAGAGCAAG
GACCCGCAGA GCGCCAACTG GTGGGGTAAC CGCAACAAGT ACCTGGTCAG CTACCTGAAG
GCGATCTACG GCAACAACGC CACCAAGGAA AACGACTTCG GCTACAACTG GCTCCCGAAG
CTCGACCCGG GCATGAACGG CTCCTGGCTG ATGATCTTCG ACAACATGCT CAAGGGGAAA
TTCAAGGGGT TCTACGCCTG GGGGCAGAAC CCCGCCTGTT CCGGGGCGAA CTCCAACAAG
GTCCGTAACG CCCTTGGGAA GCTCGACTGG ATGGTGGCGG TCAACCTCTT CGACAACGAG
ACCGCCTCCT TCTGGAAGGG ACCGGGGATG GACCCGGCCA AGGTGAAGAC GGAGGTCTTC
TTCCTTCCCG CGGCGGCATC CTTCGAGAAG GAAGGCTCCA TCACCAACTC CGGGCGCTGG
GCCCAGTGGC GCTATGCGGC GGTCAAGCCG CTCGGGCAGA GCAAGCCCGA CTCCGAGATC
ATGAACGACC TGTACCAGGC GATCAGGGTT CTCTACGCGA AAGAAGGGGG CGCGCTCCCC
GATCAACTTT TGAAACTTAC CTGGAACTAC GGCTTCAAAA GGGCCGACGG CAGCATCCGC
TCCATCGACA TCCACCAGGT GGCCAAGGAG ATCAACGGCT ACTTCCTCCA GGACGTCGCC
GAGCCCGCCA AGCCGCTCAA ACCCGGTGAG GCACCCCCGA AACCGCCCCA ACCCTGGGAA
GCGAAGAAGC TTCTCGGCAA AAAGGGAGAA CTGGTGGGAG GTTTCGCCCA GCTCCAGGCC
GACGGGAGCA CCTCCTGCGG CTCGTGGATC TTCTGCCAGA GCTACAACGA GAAAGGGAAC
ATGATGGCCC GGCGCGGCAA GAAGGACCCC ACGGGCCTCG GGATGTTCCC GGAATGGAGC
TGGTGCTGGC CGGTGAACCG CCGCATCATC TACAACCGCG CCTCGTGCGA CCCAAGCGGC
AAGCCATTCA ACGTGAAAAA GGCAGTGGTC TACTGGAACC CGTTGGCGGT GCTGCCGGAC
GGCAAAATGG GGGCATGGGT GGGCGACGTC CCCGACGGCC CCTGGCCGCC TCTTGCCGCA
GGAGCGGAGG GGAGAAAGCC CTTCATCATG AGGGCGGACG GGGTGGCCGC GATCTTCGGT
CCGGGGCTTA AGGACGGCCC CTTCCCCGAG CACTACGAGC CGATGGAGTC GCCTCTGGCC
CAGAATCTTC TCTCCAAACA GCTCAACAAC CCGGCCGTAA AGATCTTCAA GGACCCCGCG
GTGAAGGAGG ACATCCTCGC CAACGCCGAC CCGCGCTTCC CGCTGGTCGC CACCACCTAT
CGCGTCACCG AGCATTGGCA GACCGGCGTC ATGACCCGCA ACACCCCTTG GCTATTGGAA
CTGCAGCCGC GCCAGTTCTG CGAGATCAGC CAGGAGCTCG CCAAGGAAAA GGGAATCGCC
AACGGCGACC TGGTCGAAGT CGCCTCCGCC CGCGGCAAGG TCGAGGCGGT GGCCATGGTG
ACCGTGCGCA TGAAGCCGAT GAAGATAGGG GACAAGGTCG TGCACCAGAT CGGCCTCCCC
TGGTGCTTTG GCTGGCACAC CCCCGGCGTG GGAGACGCCG CCAACCTGCT GACCCCCACC
GCGGGGGACG CCAATACGAT GATTCCCGAG ACCAAGGCGT TCATGGCCGG GATCGCGAGA
AAGGGGTGA
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| Protein sequence | MTNHWIDFKN ADVILIMGAN PAENHPVAFR WILKAKESGA KVICVDPRFT RSAAKSDLYA
PLRSGTDIAF LGGMINHILQ NKLYFEQYVA EYTNASYLVS GDFKLPGELD GLFSGYDPQK
RSYDVKSWSF QKEADDSIRK DPTLQDPNCV FQLLKKHYSR YTPELVSKTT GTPKEKLLEV
YQLYASTGRP DRAGTSLYAM GWTQHTVGTQ NIRTMSIIQL LLGNIGVAGG GVNALRGESN
VQGSTDQGLL FHILPGYMPV PSADLPTTAA YIEKHTPKSK DPQSANWWGN RNKYLVSYLK
AIYGNNATKE NDFGYNWLPK LDPGMNGSWL MIFDNMLKGK FKGFYAWGQN PACSGANSNK
VRNALGKLDW MVAVNLFDNE TASFWKGPGM DPAKVKTEVF FLPAAASFEK EGSITNSGRW
AQWRYAAVKP LGQSKPDSEI MNDLYQAIRV LYAKEGGALP DQLLKLTWNY GFKRADGSIR
SIDIHQVAKE INGYFLQDVA EPAKPLKPGE APPKPPQPWE AKKLLGKKGE LVGGFAQLQA
DGSTSCGSWI FCQSYNEKGN MMARRGKKDP TGLGMFPEWS WCWPVNRRII YNRASCDPSG
KPFNVKKAVV YWNPLAVLPD GKMGAWVGDV PDGPWPPLAA GAEGRKPFIM RADGVAAIFG
PGLKDGPFPE HYEPMESPLA QNLLSKQLNN PAVKIFKDPA VKEDILANAD PRFPLVATTY
RVTEHWQTGV MTRNTPWLLE LQPRQFCEIS QELAKEKGIA NGDLVEVASA RGKVEAVAMV
TVRMKPMKIG DKVVHQIGLP WCFGWHTPGV GDAANLLTPT AGDANTMIPE TKAFMAGIAR
KG
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