Gene Gbem_1548 details

Gene Information

• Locus tag: Gbem_1548
• ID: 6781536
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1794143
• End bp: 1794742
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642767542
• Product: Pilus assembly protein PilO
• Protein accession: YP_002138362
• Protein GI: 197117935
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3167] Tfp pilus assembly protein PilO

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCCAC AAATAGAAAA ATTGCTCAAG CTCCCGACCA AGGAGAAGGT CGCCCTGTTG 
GCTTTGGTGC TGATAGTGGA GGGGGTCGCC CTTTTCTATG GGCTGCACCG CCCGAAGATG 
GACGAGCTGA AGGAGCTCAA GGCGAAGCAG GAAGAACTCC AGAAGCAGAT CCAGGAAAGC 
CGCAGCATCG CCAACAACCT GCCGCGCTTC AAGGCCGAGT ACGAGCAGCT CAAGAAGGAC 
CTGGACAACG CCCTCACCGA GCTTCCCAAC CAGAAGGAGA TCCCGTCGCT TCTGACCAGC 
ATCTCCACCC AGGGGAAAGG GGCGGGGCTC GACTTCCTGC TCTTCAGGCC CAAGCCAGAG 
GTTCCCAAGG ACTTCTACGC GGAAGTGCCG GTGGACATCG CGGTGGCGGG GACCTACTAC 
CAGGTCGCCG ATTTCTTCCT TTCGGTGGGA AAATTGCCGC GCATCGTCAA CATCACCAAC 
GTAAACGTCT CTGATATCAA GGAGAGCAAC GGGCGGACCA CCCTGAAGGT CAGCTGCCTG 
GCCACCACCT TCCGCTTCCT CGACCCTAAA GAGAAAAAAA ATGAAAAAAA GCCTAAATAA 

 

Protein sequence

MDPQIEKLLK LPTKEKVALL ALVLIVEGVA LFYGLHRPKM DELKELKAKQ EELQKQIQES 
RSIANNLPRF KAEYEQLKKD LDNALTELPN QKEIPSLLTS ISTQGKGAGL DFLLFRPKPE 
VPKDFYAEVP VDIAVAGTYY QVADFFLSVG KLPRIVNITN VNVSDIKESN GRTTLKVSCL 
ATTFRFLDPK EKKNEKKPK