Gene Gbem_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1525 
Symbol 
ID6781513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1765184 
End bp1766224 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content63% 
IMG OID642767519 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_002138339 
Protein GI197117912 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0672649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAACAG TACCATTTAA CGAAGAACTC ATCGACACCC ATCTCGTAGT CGACGTACGC 
ACCCCCCTGG AATACGAGGA GGATCACCTC CCCGGCGCCA TCAACGTCCC GCTTCTCACC
AACGAAGAGC GGGTGGAGAT CGGCATCCTG CATAAAGAGA CCGGCCCGCA TGCCGCAAGG
AGAAGGGGGC TCGAGCTCAC CGCGCACCGC TTCCCGCAAA TGGTGGAGGA GATAGCGACA
GCCGCGGCGG GAAGGCCGAT CCTCGTCTAC TGCTGGCGGG GAGGGCTCAG GAGCAAGACG
GTCACCGTCA TCCTGGATCT CGCCGGCTTC AAGGCGGTGC AGCTGCAAGG AGGGTACAAG
AGCTTCCGCC ACGAGGTGAG CGAGTACTTC ACCCCCTTCA CCCCCAAGGC GCCGCTCGTC
GTCTTGCACG GCATGACCGG CATCGGCAAG ACCACGCTTT TGCAGCGCCT GAAAGAGCGC
GGCAACTCGG TGCTCGATCT GGAGGGGCTC GCCTGCCACC GCGGTTCCGC CTTCGGCCAG
CTGGGATTGA ACCAGACCCT CACCCAGAAG CGCTTCGAGA CCCTTTTGTG GGACGAGATC
AGGAAGGCCC CGGCGGGGCG CCCACTCATC CTGGAAGGGG AGAGCGAGCG CATCGGGCGG
GTGTCGCTTC CCGGGGACTT CTACCAGAAG ATGGCGGCCG GCATCAGGGT CTGGTGCCAC
GCGCAGCTCA AGACCCGGGT GCAGCGGCTC ATCGACGAGT ACGGTCTTCC CGGCTACAAG
GAAGAGATGG CGGTAGCGCT GCAGAGGATC CGGAAGAAAC TGGGCGGGAA AAGGTGCGAG
GAGCTGGCGG AAAACCTGGA GAAATGGGAG CTGGAGCCCT TCATGGCGGG ACTTGTGAAC
GACTACTACG ACAAGGTCTA CTACAAAAAC CGCAGCTGGG AGGCGGACAC GGAGCTTGGC
ATGGAGGATT TCGACCAGGC GGCCGTCGAG CTGGAGCGCT ATCTATCCCT GCGTTTCAAA
ACGGATGGCG CGAGCGCCTG A
 
Protein sequence
METVPFNEEL IDTHLVVDVR TPLEYEEDHL PGAINVPLLT NEERVEIGIL HKETGPHAAR 
RRGLELTAHR FPQMVEEIAT AAAGRPILVY CWRGGLRSKT VTVILDLAGF KAVQLQGGYK
SFRHEVSEYF TPFTPKAPLV VLHGMTGIGK TTLLQRLKER GNSVLDLEGL ACHRGSAFGQ
LGLNQTLTQK RFETLLWDEI RKAPAGRPLI LEGESERIGR VSLPGDFYQK MAAGIRVWCH
AQLKTRVQRL IDEYGLPGYK EEMAVALQRI RKKLGGKRCE ELAENLEKWE LEPFMAGLVN
DYYDKVYYKN RSWEADTELG MEDFDQAAVE LERYLSLRFK TDGASA