| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1514 |
|---|
| Symbol | |
|---|
| ID | 6781502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1752242 |
|---|
| End bp | 1753762 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642767508 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_002138328 |
|---|
| Protein GI | 197117901 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATT CCTCCTGGTC CATCTTCGTG GTGCTTTTGG TGCTGGCTTC CTTCATCGTG
GTGGGGCTCA GGCAGAAGTC GCGCGAGAGT CAGGAGTACG GCTTCGGCGG CCGCTACACC
GGGAGGATCG GGGGAGGTGC GGCCATCGCC AGCAACTGGA TGAGCGCCGC AAGCCTCATG
GGTCTTGCCG GGATCATCTA CCTGCAGGGG TACCAGGGGC TCGCCTACGT GATCGGCTGG
ACCGGGGGGT ACGTGCTGCT CCTCGTGCTC CTGGCGAGCC AGATCCGCCG CTTCGGCAAG
TTCACCGCCC CCGAGTTCGT GGGGGAGCGC TACGGCTCCC AGGCCGCGCG CGCCATCGCC
GCCGCCATCT CCATTGCCAT CTCCATCATC TACTGCGTGG CCCAGTTCAA GGGGATAGGC
CTCATCTTCT CCTTCATGTT CGGCATCGAC TACCAGCAGG GGGTGACCTA CGGGGCGCTG
GCCGTGGTCT CCTACCTGGT CATCTCGGGG ATGCTGGGGG TCCCGAGAAA CCAGCAGCTG
CAATACCTGG TGATCAGCGT CTCCTTCATC GTCCCGCTCA TGTGGCTCGC CCGAAAGCTC
GGCTACTTCT GGCTCCTCCC CCAGTTCGGC TACGGCCGCG CTCTTACCGA TCTGTCGCGC
CAGTTCAACA TCGACTTCAC CCTCCCCTTC GCCAACGGCT CCCTCTACCA GTGGTGCGCG
CTCTGTTTCA CACTCATGGT CGGCACCGCG GGGCTTCCCC ACGTGCTGTC GCGCTTCTAC
ACGGTACCCA ACGTGCGCGA CGCGCGCTGG AGCGTGGTCT GGGGGCTCTT CTTCATCGCC
CTCATCTACT GGTCCGCCCC CGCCTTCTCC GTCTTCGGCA GGCTCTTGGA GGCGAGAAGC
GGCCTCATCC CCGACCCCGC CGCGGCCCGC GATGCAGCCG ACGTGATCGC GCTTAAGACT
GCGGTCTGGG CGGGGCTTCC GGGGTGGCTC GTCGGGGTTC TCGCCGCAGG GGCCCTCTCG
GCCGCCTTCT TCACCGTGGC GGGGCTGCTG ATGACCGGCG CCGCCTCGAT CTCCCACGAT
ATCTACTATT CCATGGTCAA CCGCAGCGCC AGCGAATCAG CGCGGATGCA GGTGGCCAAG
GGTGGGACCT TGGTGCTCGC CGCCATCGTG CTCCTTTTGG CGCTCGACCC GCCGGGTCTG
ATCGCGGAGA TCACGGCCGT CGCCTTCGCT TTGGCAGGCA ACACCATCTT CCCGCTCTTT
CTTCTGGGGA TCTGGTGGGG GCGCGCCAAC CGCTACGGCG CCATAGCGGG GATGCTGACC
GGCATCGTCT GTACCGCCAT CGCCCCTCTT TGCGGCGGTA TTTTCCCGCA GCTGGCCCTC
CTCTTCCCGG TCACCTCGTC GGCGCTTCTG GGGGCCCCCC TGGTGATAGC GGTGATGATA
GCGGTTTCGC TCGCCACCCC CGCCCCATCG GAGGAGATGG GGCGCTTTCT GGAAAAAGAG
GTGCACGGGC ACCTCGACTG A
|
|---|
| Protein sequence | MNDSSWSIFV VLLVLASFIV VGLRQKSRES QEYGFGGRYT GRIGGGAAIA SNWMSAASLM
GLAGIIYLQG YQGLAYVIGW TGGYVLLLVL LASQIRRFGK FTAPEFVGER YGSQAARAIA
AAISIAISII YCVAQFKGIG LIFSFMFGID YQQGVTYGAL AVVSYLVISG MLGVPRNQQL
QYLVISVSFI VPLMWLARKL GYFWLLPQFG YGRALTDLSR QFNIDFTLPF ANGSLYQWCA
LCFTLMVGTA GLPHVLSRFY TVPNVRDARW SVVWGLFFIA LIYWSAPAFS VFGRLLEARS
GLIPDPAAAR DAADVIALKT AVWAGLPGWL VGVLAAGALS AAFFTVAGLL MTGAASISHD
IYYSMVNRSA SESARMQVAK GGTLVLAAIV LLLALDPPGL IAEITAVAFA LAGNTIFPLF
LLGIWWGRAN RYGAIAGMLT GIVCTAIAPL CGGIFPQLAL LFPVTSSALL GAPLVIAVMI
AVSLATPAPS EEMGRFLEKE VHGHLD
|
|---|
| |