Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1486 |
Symbol | |
ID | 6781473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 1722704 |
End bp | 1725364 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642767479 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002138300 |
Protein GI | 197117873 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAC GCGCCCTCAA CCTGAGATCG AAGATCCTGG CCATATTCCT GACCCTCTCC ATGGCGACCA TAGCCGGCAT GGTCGTGATC GCCCTTTTGT TCATCAAGCC CCTTCTGGAA TCGAAGCTCG AAAAGCGCGC CCACTCCATA GCCCACGCCA TCTCTTCCCA ATGCACAAAC CCGATCCTCT CCAGGAACTT CCTTCAGTTG GACCTGTATT TACGCGAGTA CACCGACTTG GAAAAGGACG TGGCCTACAT CTACGTCACG ACACCGAGCG GTGAGGTCAT CGCCCACTCC TTCGGCCGTA CCTTCCCCGT GGCGCTGAAA GAGTTGAGCC AGCCGACCGG CAAAAAGTCA AACGGAAGCA CCAGGCTCCA CACGACGGAA GGAGAGGTCA TCCAGATCTC GGAACCCATC CTCGACGGAC ATCTGGGCAG GCTGCATGTG GGAATGTCCC TCGCCCCGAT ACACAAGGAC ATAAACGAGA TCATCATGTC CTTCGTCAGT TTCGCAGCCC TGTTCTTCTT CTCGTCTTTG CTGCTGATAC TGTTCATCGA CAGGTGGATC GTCAGGCCCA TTTTCCAGAT CAGGTCCGCG TCGTTGAAGG TCAAAGCGGG GGACATCGAC AGCAGGGTCA CGGTACGATC CCGGGACGAG ATCGGAAGCC TCGCCGAGGA TTTCAACAGC ATGCTCGACG CCATCAAGGA GTCAAGGGCG TCGCTGGTTC AGGAAAAACA GCTGCTGACC GAAAGCGAAA ACAGGCTGAG GAAAATCATC CAGCAAAGCC CCCTCTCGAT GGCGCTCATC TCCCCGGACG GCGCCGTAGA GTACATAAAC GACTACGCCG TGCAGACCTT CGGTTACCAG CCGCAGGACA TACCCCGCAT CGAAGACTGG TGGCTCAAGG CGTGCCCCGA TCCGGCCTAC CGCGAGCAGG TGATCGGGCA GTGGACTGGG CTCGTGGAAA AGGCGGCCGA GGCAAGCGGC TACATCGAGC GTCGGGAATA CCAGGTCACC TGCAAGGACG GAACGCTTAA GACCATCCTG ATTTTCGGGC TGCTGATCGA CAGCGAGGTC TTCGTCGTCT TCGAGGACAT CACCTCGCTC AAGCGGGTCG AGGAAGAGTT GAGGGCCTCC AAAGAGCACC TGGACGCCAC CATGAACGCC CTGCCGGATC TCTTGTTCAG GATCGACCGG GAAGGCCGCT TCTACGATGC CCGCTATTCC AGCACGGACG AGCTCTACGT CGCGCCGGAG GTGTTCCTCG GCAAGCGGCT GGTCGAGGTA CTGCCGCCGG AGGCTGCAAC CACCATCATG GCCGCGCTTG CCGAGGCCGT TGCCAAGGGG AGCCACCGGG GGGCCACCTA TTCGCTCCCA CTGCCCGAGG GAGAGCGGTG GTACGAACTC TCGCTGGCCG CGATGGGAAA CCCGGACCTG CCGCAGACCC AATTTATCGT CCTTGCCCGC GACATCACCG AAAGGAGGCT TGCCGAGCAG GCGCGGCTCA AACTCGAACA GCAGCTTCTC CACGCCCAGA AACTAGAGAG CCTCGGGGTA TTGGCGGGGG GGATCGCCCA TGACTTCAAC AACCTGCTGA CCGCCATCGT CGGCAACACC GATCTCGCCT TGATGCGTCT CAACCCGGAG TCGCCGGTAC GGGACAACCT GCAGCGCATC GAGCAGGCGG CCAGCCGTGC GGCAGACCTG TCCAAGCAGA TGCTGGCGTA CTCCGGCAAA GGGAAGTTCG TCATTCAAAC CATCGACCTG AACCGGCTGA TCAGGGAAAT GACGCACATG CTGGAAGTTT CCATCTCCAA GAAGGCCGTG CTCAACTTCA ACCTTGCCGA TCCGCTGCCG CCCATCGAGG CCGACGCCAC CCAGCTGCAC CAGATCATCA TGAACCTGAT CATCAACGCC TCCGAAGCCA TCGACCGTGA GAGCGGGGTC ATCTCGATTA CTACCGGCAG CATGCAGTGC GCCAGGAACT ACTTGAACGG CATCTGGCTG CACGAGCAGC TTGCCGAGGG GCTCTACGTC TGGCTGGAGA TAACCGACAC CGGTTGCGGC ATGGACGCGG AAACGGCGGG GAAGATCTTC GACCCCTTCT TCACCACCAA GTTCACCGGC CGGGGGCTCG GCATGGCCGC CGTGCTCGGC ATCGTCCGCG GCCACAAGGG GGCGATCACG GTCAAAAGCG AACCCGGCCG CGGCGCCTCC TTCAAGGTGT TCCTTCCTGC CGGCGGCAAG CCAAAGGAAA CCCTCGACCG GGCAGATCAG GATGCGGCGG AGTGGAGGGG CAGCGGAACC GTGCTGTTCG TCGACGATGA ACAGACGGTC CTGGAGATAG GGAGCGAGAT GCTGAAGGAA CTCGGTTTCG AGGTCGCAAC CGCGGCGGAC GGCGGCGAGG CGCTGGATAT CTTCAAACAG GACGCGGATA GATTTTCCTT CATCATCCTG GACCTGACCA TGCCCCGCCT GGACGGCGAG CAGACCTACC GGCAGCTGAG GCAGCTAAAG CCCGAGGTCA AGGTCATCAT GTCCAGCGGC TACAACGAAC AGGAAATCAA CCAGCGCCTG GGCGGCACGG GGCTGGCCGG TTTCATCCAG AAACCGTACA ACCTCTCCAT GCTCAGGGAC GTCATCAGGA ATATGAAGTA A
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Protein sequence | MGKRALNLRS KILAIFLTLS MATIAGMVVI ALLFIKPLLE SKLEKRAHSI AHAISSQCTN PILSRNFLQL DLYLREYTDL EKDVAYIYVT TPSGEVIAHS FGRTFPVALK ELSQPTGKKS NGSTRLHTTE GEVIQISEPI LDGHLGRLHV GMSLAPIHKD INEIIMSFVS FAALFFFSSL LLILFIDRWI VRPIFQIRSA SLKVKAGDID SRVTVRSRDE IGSLAEDFNS MLDAIKESRA SLVQEKQLLT ESENRLRKII QQSPLSMALI SPDGAVEYIN DYAVQTFGYQ PQDIPRIEDW WLKACPDPAY REQVIGQWTG LVEKAAEASG YIERREYQVT CKDGTLKTIL IFGLLIDSEV FVVFEDITSL KRVEEELRAS KEHLDATMNA LPDLLFRIDR EGRFYDARYS STDELYVAPE VFLGKRLVEV LPPEAATTIM AALAEAVAKG SHRGATYSLP LPEGERWYEL SLAAMGNPDL PQTQFIVLAR DITERRLAEQ ARLKLEQQLL HAQKLESLGV LAGGIAHDFN NLLTAIVGNT DLALMRLNPE SPVRDNLQRI EQAASRAADL SKQMLAYSGK GKFVIQTIDL NRLIREMTHM LEVSISKKAV LNFNLADPLP PIEADATQLH QIIMNLIINA SEAIDRESGV ISITTGSMQC ARNYLNGIWL HEQLAEGLYV WLEITDTGCG MDAETAGKIF DPFFTTKFTG RGLGMAAVLG IVRGHKGAIT VKSEPGRGAS FKVFLPAGGK PKETLDRADQ DAAEWRGSGT VLFVDDEQTV LEIGSEMLKE LGFEVATAAD GGEALDIFKQ DADRFSFIIL DLTMPRLDGE QTYRQLRQLK PEVKVIMSSG YNEQEINQRL GGTGLAGFIQ KPYNLSMLRD VIRNMK
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