| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1478 |
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| Symbol | |
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| ID | 6781465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1710822 |
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| End bp | 1713797 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642767471 |
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| Product | hypothetical protein |
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| Protein accession | YP_002138292 |
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| Protein GI | 197117865 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGGCA TTCAATGGCT GGGTCTGATC TTTTTCACTA CGGTTATCTT TCTGGGTGGT
TGCACTGGCG GTGGCGGTGG CGGTGACGGC GATTCCTCGC AGCTCTTGAT AAACATGAAC
CAAAAAATCA CGCCGCTCGC GACCCCGTTG TCCACCTTCG AGACGTTGAA CCCTGGCCTG
TCGGACAAAC CGGACTGGCT CGCAGGCTAC GCAGTCAGTA CGGTGGTGAG CCCCGACAGT
AAGACCATGC TGGTCCTGAC AAGCGGCTAC AACCGCGTCT TCACCGCGAC TCCCAGCACT
CCCTATCCTT GGTACACCCC GGACTCGAAC GAGTACGTGT TCATCTACGA CATCTCGACA
GGGAGGCCGA TCAAGAAACA GGTGGTACAG GTCCCGAACA CCTTCCACGG GATCGTCTTC
GATCCGTCAG GCAAGGCCTT TTACGTAGCT GGCGGCGTGA ACGACAATAT CCACATTTTC
ACCATGATCA GCGACGGGAA ATGGGGGGAA ACGTCATCGC CACTTTCCAT GATGCACCCG
GCGGGCAACG GTCTTGGCGT ATCGCAGCCT GCGCCGGGAG GAGCGGTGAG CGTCAACACC
CAGATTGCGG TGAAACCTTG CGCTGCCGGC CTCGCCATAT CGAACGACGG CAAGACACTG
GTGGCGGCGA ATTTCTATAA CGACTCGATA ACGATCTTCA GGGGGGGCTT GAATCACTGG
TCCGCAGGAA TCGAACGCGA CCTGCGCCCC GGCAAGAGCG GCGGAACATC TGGGACGGCA
GGCGGCGAAT ATCCTTTCTG GGTGGCGGTA AAGGGGAGCG AGACGAATGG TACCGCGAAA
GCCTTTGTAT CGAGCATCCG TGACCGCGAG GTGGTTGTGG TGGACCTCAA CGGCGCGCCG
TCGGTAACGG CGCGGATCGC CGTAAAAGGC AAACCCAACA AAATGACCCT GAACAAAGAC
CAGTCGCTTC TGTACCTGGT CGAGGATCAG ACCGATACGG TCGATGTCAT CAACACCGCA
ACGAACACGA TAGTGGAAAC CATCCAGGTC ATCGCCCCTC CTTCGGCCAT GCCCGACTCG
CTGGCGAAAT TCAGGGGAGC GAACTCCAAC AGCGCCACGC TCTCGCCCGA TGAAAAACAA
CTCTACGTGA CAAACGGAAA CCTGAACTGC GTCGCGGTCG TGACGTTGGG TGGAGCGAAC
GGCGGCAGCC AGGTTACCGG TCTGATCCCG ACGGGATGGT ATCCGAATTC GGTTAGCTTC
AGCAGCGACG GGAACTGGGT GTACGTGGTC AACGGAAAAT CTGCGACCGG CGCGAATCCC
AGCTTCCGTT ACAGTAACGG CCCCCCCTCG TACCCTAACG GTTTCTTGAC GAACCAGTAC
AATCCCCAGC GGACCAGGGC CGGACTGCAG AGCTTCCCGC GCCCCACCTC GGCACAGATC
GCAACCTTGA CTGCACAGGT AGCATCGAAC AACCGTTTCT CCTACACCGA CAGCGGCAAC
GATATGGCGA CCATGGCGGC TGTACGGGAC AAGGTCAAAC ACGTCATTTT CATCATCAAG
GAGAACCGCA CCTACGACCA GGTTCTGGGC GATCTGGAAG TCGGTAACGG CGACCCCGAT
TTGGCGCAGT TCGGCAGGCG TTACACGCCC AATCAACACA ATCTGGCGCG ACAGTTCGTT
ACCCTCGACA ACTTCTATGC AACTGCGGAA GTGAGCAACG ACGGCTGGTG CTGGACCACT
GCAGGGCGGG CGCCCGACGT AGTGGAGCAC ACGGTTTCGG TCACCTACGC AGGGCGCGGC
CTGGGCCTGG ACACCGAAGG CGCGAACCGC AGTGTGAACA TCGCCCAGGA CCTTGCCACC
CGCAAGGCTT TCAACCCCCT CACGCCGGAC GATCAAGACC TGCTGCCGGG ACAAAACAAC
TCGGCTGCAC CCGATGGTCC GCCACCGACT TATGAGGCGG ACAAGGGGTA TCTCTGGGAC
GCCGCACTAA GGAAAGGTCT CACTATACGC AACTACGGCT TCTTCGTGGA CACAACGCGT
TACAACATCC CCCAAAGCGA CCCGAACTTT GTCCCCTTGG ATCCGAACCC GTTCTCGAAA
AGCCTGACCG TCGCCTTTCC TACGAGCCCC TCCCTGACAA CACTCACGGA CCGGTACTTC
CGGGGGTTCG ACAACGCGTA TCCGGATTAC TATCGTTTCA AGGAATGGGA GAGAGAGTTC
GACCTTTATG AGGCCAACGA CGGCCTGCCT ACGTTGAGCC TGGTTCGTTT CATGCACGAT
CACACCGGGA ATTACAATAC CGCGATTGAA GGGGTGAACA CGCCCGAGTT ACAGCAAGCG
GACAACGACT ATGCTGTCGG CCTTTTGGTG GAGAAGATTT CCAAAAGCCC GAAATACAAG
GACAACACCC TGATCTTCGT AATCGAGGAC GACGCGCAGG ATGGTGGGGA CCACATGGAT
TCGCACCGCA CCATCGCATT TGTCGCGGGT GCTTATGTGA AGCAAGGGCA GGTTGTTTCT
TCGCAGTACA ACAGCGTCAA CTTCCTTCGC ACCATCGAAG AGGTCCTGGG GCTTCTGCCG
ATGAACCTGA ACGACGCGCT GGCAAGGCCG ATGGCAGACA TCTTCACCAC CACGCCGAAC
CCATGGAGCT TTACGGCCGT TCCGGCACAG ATTCTCAACG GCACGACGCT GCCGCCGTTC
CTAGACAAGT CGGCCAACAA ATTGGCCCGC CTCGACATCC CGAAATCGAC GCGAGACGCC
AAATACTGGG CGAAGGTTAC CAAGGGAATG AACTTCGCCA CTGAAGACCA GTTCGATTTC
GCCGCCTACA ATCGCATCCT GTGGAAAGGT CTGATGGGCG ACAAGCCGTA TCCCATTGAG
CGCAGCGGCA AGAATCTGCG CGGGAACCGC AAGGAACTGC TGGCGCGCTA CGATCGCTCG
TTGAAAGGCG CGATCAAACA AACAAGCCTG AAGTAA
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| Protein sequence | MRGIQWLGLI FFTTVIFLGG CTGGGGGGDG DSSQLLINMN QKITPLATPL STFETLNPGL
SDKPDWLAGY AVSTVVSPDS KTMLVLTSGY NRVFTATPST PYPWYTPDSN EYVFIYDIST
GRPIKKQVVQ VPNTFHGIVF DPSGKAFYVA GGVNDNIHIF TMISDGKWGE TSSPLSMMHP
AGNGLGVSQP APGGAVSVNT QIAVKPCAAG LAISNDGKTL VAANFYNDSI TIFRGGLNHW
SAGIERDLRP GKSGGTSGTA GGEYPFWVAV KGSETNGTAK AFVSSIRDRE VVVVDLNGAP
SVTARIAVKG KPNKMTLNKD QSLLYLVEDQ TDTVDVINTA TNTIVETIQV IAPPSAMPDS
LAKFRGANSN SATLSPDEKQ LYVTNGNLNC VAVVTLGGAN GGSQVTGLIP TGWYPNSVSF
SSDGNWVYVV NGKSATGANP SFRYSNGPPS YPNGFLTNQY NPQRTRAGLQ SFPRPTSAQI
ATLTAQVASN NRFSYTDSGN DMATMAAVRD KVKHVIFIIK ENRTYDQVLG DLEVGNGDPD
LAQFGRRYTP NQHNLARQFV TLDNFYATAE VSNDGWCWTT AGRAPDVVEH TVSVTYAGRG
LGLDTEGANR SVNIAQDLAT RKAFNPLTPD DQDLLPGQNN SAAPDGPPPT YEADKGYLWD
AALRKGLTIR NYGFFVDTTR YNIPQSDPNF VPLDPNPFSK SLTVAFPTSP SLTTLTDRYF
RGFDNAYPDY YRFKEWEREF DLYEANDGLP TLSLVRFMHD HTGNYNTAIE GVNTPELQQA
DNDYAVGLLV EKISKSPKYK DNTLIFVIED DAQDGGDHMD SHRTIAFVAG AYVKQGQVVS
SQYNSVNFLR TIEEVLGLLP MNLNDALARP MADIFTTTPN PWSFTAVPAQ ILNGTTLPPF
LDKSANKLAR LDIPKSTRDA KYWAKVTKGM NFATEDQFDF AAYNRILWKG LMGDKPYPIE
RSGKNLRGNR KELLARYDRS LKGAIKQTSL K
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