Gene Gbem_1450 details

Gene Information

• Locus tag: Gbem_1450
• ID: 6781437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1675560
• End bp: 1677470
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642767443
• Product: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
• Protein accession: YP_002138264
• Protein GI: 197117837
• COG category: [C] Energy production and conversion
• COG ID: [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; [COG3411] Ferredoxin; [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.101445
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAGGA TAAAATCGCC CGCAGAATTG GAAGCATTCA GGAAAGCCAT CCTGGCCAAA 
AGGGATGACA AGAAGCCCTG CATCACGCTC TGCTCCGGCA GCGCCTGCCA CGCCACGGGG 
AGCGAGAAGG TCGCCGACGC GATCCTGGCC GAGTTGGAGA GCCACGGGCT CAAGGATCAG 
GTCGATATCA GAAGGACCGG CTGCCACGGC TTCTGCGAGC AGGGCCCCAT CGTGGTGGTC 
TACCCGGAAG GGATCAGCTA CCTGAAGGTC AAGCCGGAGG ACGTCTGCGA GATCGTCTCC 
CATACCTTCA AGGAGAAGAA GCTGGTTGAG CGGCTGCTCT ACGTCGACCC GAACACCGGC 
GACAAGTCGA GCCACGAGCA CGACATCCCC TTCTACAAGA ACCAGCAGCG CCTCATCCTA 
GGTCTCAACA CCAAGATCGA CCCGAAGAGT CTGGAGGATT ACCTGGCCGT CGGCGGCTAC 
CAGGCCATGG CCAAGGCGCT GCTGCAGATG ACACCGGAAG AGGTGATCGG CGAGGTCAAG 
GGGGCGAAGC TCAGGGGACG CGGCGGCGCC GGCTTCCCCT CGGGGACCAA ATGGGAGTTC 
GCGCGCAACG CGCCGGGGGA CCAAAAGTAC GTCGTGGTCA ACTGCGACGA GGGGGACCCG 
GGTGCCTACA TGGACCGCTC CCTCATGGAG GGTAACCCCT TCACCGTGCT CGAAGGGCTC 
CTGATCGGCG CCTACGCCAT CGGCGCGAGT GAGGGTTACA TCTACGTCCG GCAGGAATAC 
CCGCTCGCCG TAGACAACCT GACCGTCGCC ATAAAAAAGG CGGAGGAACA CGGCTTCCTG 
GGGAAAAACA TCCTCGGCTC CGGGTTCGAC TTCACCGTCA AGGTGCACCG GGGTGCGGGG 
GCGTTCATCT GCGGCGAGGA GACCTCACTC CTGCAGTCGC TGGAAGGAAA GCCCGGCGAG 
CCCAAGCCGA GGCCCCCTTT CCCGGCAGTC CGCGGCCTCT GGGGCAAGCC GACCAACATC 
AACAACGTCG AGACCTGGGC CAATATCCCG GTGATCATCA ACAAGGGGGC CGATTACTTC 
AGCTCCATCG GGACCGAGAG CAGCAAGGGG ACCAAGATCT TCTCCCTGGT AGGGAAGGTG 
AACAACACCG GCCTCGTCGA GGTCCCCATG GGGATGCCGC TCAGGGACAT CATCTTCAAG 
ATCGGCGGCG GGGTCCCCAA CGGCAAGAAG TTCAAGGCGG TGCAGACCGG CGGCCCTTCC 
GGCGGCTGCA TTCCCGAGGA ATACCTCGAC GTCAAGGTCG ACTTCGACGA GCTGATGAAG 
ATGGGCGCCA TGATGGGTTC CGGCGGCATG ATCGTCATGG ACGAGGACAC CTGTCTCGTC 
GACATCGCCC GGTACTTCCT GGAGTTTTTG AGCGACGAGT CCTGCGGCAA GTGCGTACCC 
TGCCGCGAGG GTATCCGCCA GATGCTCAAG GTGATGACCG CCATCACTCA AGGGAAGGGT 
AAGGAAGGGG ACATCGAACT CCTGGAGAAC ATGGCCATGG CGACCCAGGG TGCGGCACTT 
TGCGCCCTTG GCAAGACCGC TCCGAACCCG GTCCTCTCCA CGCTCAAGTA CTTCCGTCAC 
GAGTACGAGG CCCACATCAA GGAGAAGAGG TGCCCGGCGC TTTCCTGCAA AGAGCTGATC 
GCCTTCCACA TCGACCCGGC GAAGTGCAAA GGGTGCGGCA GCTGTCTCAG GAAATGCCCC 
GCCACCGCCA TCGAGGGTGG CAAGAAGACC ATCCACGTCA TCGACCAGGA GAAGTGCACC 
AAGTGCGGCA CCTGTATCGA AGCCTGCCCG GCGGCGTTCC ATGCGATAAG CAAGCTCTCC 
GGCGTGCCGG TGCCGGAACC GCCCCCTCAA TCGGCAAGGG CCATAGCTTA A 

 

Protein sequence

MPRIKSPAEL EAFRKAILAK RDDKKPCITL CSGSACHATG SEKVADAILA ELESHGLKDQ 
VDIRRTGCHG FCEQGPIVVV YPEGISYLKV KPEDVCEIVS HTFKEKKLVE RLLYVDPNTG 
DKSSHEHDIP FYKNQQRLIL GLNTKIDPKS LEDYLAVGGY QAMAKALLQM TPEEVIGEVK 
GAKLRGRGGA GFPSGTKWEF ARNAPGDQKY VVVNCDEGDP GAYMDRSLME GNPFTVLEGL 
LIGAYAIGAS EGYIYVRQEY PLAVDNLTVA IKKAEEHGFL GKNILGSGFD FTVKVHRGAG 
AFICGEETSL LQSLEGKPGE PKPRPPFPAV RGLWGKPTNI NNVETWANIP VIINKGADYF 
SSIGTESSKG TKIFSLVGKV NNTGLVEVPM GMPLRDIIFK IGGGVPNGKK FKAVQTGGPS 
GGCIPEEYLD VKVDFDELMK MGAMMGSGGM IVMDEDTCLV DIARYFLEFL SDESCGKCVP 
CREGIRQMLK VMTAITQGKG KEGDIELLEN MAMATQGAAL CALGKTAPNP VLSTLKYFRH 
EYEAHIKEKR CPALSCKELI AFHIDPAKCK GCGSCLRKCP ATAIEGGKKT IHVIDQEKCT 
KCGTCIEACP AAFHAISKLS GVPVPEPPPQ SARAIA