Gene Gbem_1448 details

Gene Information

• Locus tag: Gbem_1448
• ID: 6781435
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1674317
• End bp: 1674955
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642767441
• Product: methyl-viologen-reducing hydrogenase delta subunit
• Protein accession: YP_002138262
• Protein GI: 197117835
• COG category: [C] Energy production and conversion
• COG ID: [COG1908] Coenzyme F420-reducing hydrogenase, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.11871
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCACCG GCAGGGTGGA CCTGGCTTTC ATCCTCAGGG CGTTCAAACA AGGCGCCGAC 
GGGGTGTTCA TCGGGGGATG CTGGCCCGGC GAATGCCACT ACGTAACCGA GGGTAACTAC 
GACGTACTGA AGAACGTGCA TATCGCCAAG AAGATGCTGG AGAAGATCGG CATCAACCCC 
GACCGCCTGA GGCTTGAGTG GATTTCGGCC TCCGAGGGGA TGCGCTACGC CGAGGTGATG 
AACGAATTCG GCAAGAGGCT CAAGGAATTG GGTGCGCTGG GCAAGGGGGA GGGGATCGAC 
GAGCGTTCCC TAAAGCTCAG GATGGAAGCG GCTTACAACC TGGTCCCCTA CGTGAAACTG 
GTGGAGAGGG AGAGGATCAG GCAGCGCTTC AAGACCGAGG AGGAGTACGA TGCCTATTTC 
GCCTCCGCGG AGCTGGAGTC GCTCTTTAAC AACCTGGTGA CGGACAACCT GGCCGTGAGC 
CAGATGACGC TCCTTTTGAA GGATAAGCCG CTCTCAACAG CCGAGATCGC CTCGGCGCTG 
AATCTCACCG CGGCCGACGT CAACAGGCAC ATCAAGTCAT CGAGCAGGAA AGGGCTGGTC 
AAGTACGACG AGGGGTTGAA CGCGTACGCG CTGGCTTAG 

 

Protein sequence

MCTGRVDLAF ILRAFKQGAD GVFIGGCWPG ECHYVTEGNY DVLKNVHIAK KMLEKIGINP 
DRLRLEWISA SEGMRYAEVM NEFGKRLKEL GALGKGEGID ERSLKLRMEA AYNLVPYVKL 
VERERIRQRF KTEEEYDAYF ASAELESLFN NLVTDNLAVS QMTLLLKDKP LSTAEIASAL 
NLTAADVNRH IKSSSRKGLV KYDEGLNAYA LA