Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1431 |
Symbol | |
ID | 6781418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1653545 |
End bp | 1654618 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642767424 |
Product | 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase |
Protein accession | YP_002138245 |
Protein GI | 197117818 |
COG category | [R] General function prediction only |
COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
TIGRFAM ID | [TIGR03201] 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000103725 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAGT CAGCGTATCG CTGGTCCATG ACCGCCGTCG GTGAACCGAT GCAAAAGGGT GAATTCGCCC CTGCGCCGGG CGCGGGAGAA GTCGTCGTCG AGGTCGCCGG CTGCGGCGTC TGCCACACCG ACCTTGGTTT CTATTACAGC GGCGTCCGCT TCAACCACCC CGCACCGCTC ACGCTGGGGC ACGAGATCAG CGGCCGCGTG GTCACGGCGG GCGAGGGGGC TGGCCAGTGG GTTGGCAAGG CGGTGCTCAT TCCGGCGGTC ATCCCCTGCG GCGAATGCGA CCTCTGCCTC TCCAGTCACG GCACCATCTG CCGCGCGCAG CAGATGCCCG GCAACGACAT CCACGGCGGC TTCGCCTCCC ACATCGTGGT TCCGGCTAAG ACCCTCTGCC CGGTCGACGA GAAGCGCCTC GCCGCGGCAG GGCTTGAGCT TGCCGACATC TCGGTCGTGG CCGACGCGGT GACCACACCT TACCAGGCAG CGGTGCAGGC CGAGGTCCAG CCCGGCGACG TCGCCATCGT GATCGGCGTG GGCGGGGTAG GCGGCTACGC GGTGCAGGTG GCCAACGCTC TCGGCGCAAC CGTCATCGCC ATCGACGTGG ACCCGGTGAA GCTGGAAAAC GTTGGCAAGC ACGGCGCGGC GCTCACCCTC AACTCCCGCG AGATCGCCGG CAAGGAACTG AAGAAGGCGA TAAACGACTT CGTGAAGGCG AAGGGGCTGA AGCAGACCTG CTGGAAGATA TTCGAATGCT CCGGCAGCAC CCCCGGCCAG GAGACCGCCT TCAGCCTCCT CACCTACGGG GCCACCCTCT CCGTCGTCGG CTTCACCATG GACAAGATCG AGCTGCGCCT CTCAAACCTG ATGGCGTTCC ACGCCAGGGC CCTTGGGAAC TGGGGCTGTC TGACCGAACT GTATCCGGCC GCGCTCGACC TCGTGCTCGA CGGAAAGGTC GCCCTGACGC CGTTCATCGA GAAGCATCCC CTGGACAACA TCAACCAGGT GTTTGCCTCC GCACATGCCC ACAAGCTCAC CAGGCGCGCC ATCTTAGTGC CGGGTCTTTC CTAG
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Protein sequence | MSKSAYRWSM TAVGEPMQKG EFAPAPGAGE VVVEVAGCGV CHTDLGFYYS GVRFNHPAPL TLGHEISGRV VTAGEGAGQW VGKAVLIPAV IPCGECDLCL SSHGTICRAQ QMPGNDIHGG FASHIVVPAK TLCPVDEKRL AAAGLELADI SVVADAVTTP YQAAVQAEVQ PGDVAIVIGV GGVGGYAVQV ANALGATVIA IDVDPVKLEN VGKHGAALTL NSREIAGKEL KKAINDFVKA KGLKQTCWKI FECSGSTPGQ ETAFSLLTYG ATLSVVGFTM DKIELRLSNL MAFHARALGN WGCLTELYPA ALDLVLDGKV ALTPFIEKHP LDNINQVFAS AHAHKLTRRA ILVPGLS
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