Gene Gbem_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1425 
Symbol 
ID6781412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1643194 
End bp1645155 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content62% 
IMG OID642767419 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002138240 
Protein GI197117813 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGC TTGACCAAAT TGGTGTAATA TGGTACCACT ATACCATTAT TACGCCGGTC 
ACCCGAAACG GTCTGGACAA AGGTACCTTC CCCGCTGGGG GAGGAGCTCT GCAGGCGAGG
TCGTCGACCT ACCAGGAAAA GGATCGTTAC ATGACCGCCT TTTTCCGCAC ATTCAAACTC
CCGCTTGCCC TTTTGCTTAT CGTAGGCCTG ACCGCCTGCG CCTTCATCAC CATCCGCCGC
GCCAACAACG GGGTCCGCGC CGAGGCGCGC GCCCGCTTCT TCGAACAGTA CAACCGTCAG
CAGTACCTCG TCGCCGAACT CACAGCGCAC TCCCTCGATG AAATGTTCGC CACCTTCAGC
CGCAACCTCG AACTGGTCGC CGGCCTCTTC GACGGCAAAG AGGTCGACCG CGAACAGTCG
CAACGGCTCA AGGTGCATCT GGAAAAGATC TACGGCTCGC TGCTCGGTAC CCCCGTTATC
GACCTGGTCG TCTTCGACAG CAAGGGGGTC GCCGTCGCCA TAGAGCCGCA CGACAATTTC
ACCTTGGGGC GCAGTTACGC CTGGCGCGAC TACTATCGGT GGGTGCGGGA CCAGCGGCAG
CCGGGGCGGA TGTACATCTC GCCCTTCATG CAGTTGGCGG GGGGGCGGAA ACGCGGGGTA
AAGGAGTTGA TCGTAGCTAG AGGGATCTAC GGCCCACGCG GCGAGTTCAA CGGCGTGGTC
GCCTGCACGC TCGACTTCGA CAAGCTGGCC CGAAAGCATG TCCTCTCCGT CAAGATCGGC
AAGCACGGCC AGGCCTGGCT CATGGACAGC ACCACCAGGA CCATCCTGGT CGACCCGAAC
GGCAGGATCG CGGGGCAGAC CTTCGACGAG GCGCTGCGGC GCAAATGGCC GCGCCTTTAC
GACCTGCTCC TTTCGGCTGA GGACGGCAAA CCCGGCAGCG GCTGGTACGA GTTCGAGGAC
CCGGCCGACC CGCGCCTGAA GGTCCGCAAG CTGGTCAGCT ACCACCCGGT GCGCCTGGAA
AACCGGCTCT GGACAGTGGG GGTGACCACG CCGGAAAGGG AGGTCGAAGC GCTCCTCTCT
TCGTTCCTGC AGCGGCAGGA GGCCATCTCC ACCACGCTCC TCGTCACCAT AATCGGAGGA
GCGGCATTCC TCCTCGCGCT GCTTTATCAC TGGAACCGCA CGCTTACCGC ACAGGTCGGC
CTGCACACCC GCGCCTTGAG CGAGACACAT TCGCGCCTGG AGGCAACCTT CGACGAATTG
CTCGTCGCCA AGAAGGTGGC CGCGGTCGGG CATCTGGCGC TCGGGCTCGC CCACGAGATC
CGCAACCCCC TTTCCGCCAT CCAGATGAAC ATGCAGATGA TCCGCAAGAA GATCGAGCCC
ACCGGGGTCC TCTGCGAGAA CTTCTCCATT GCCGACGGCG AAATCCAGCG CCTGAACCGC
CTGTTGAAAG ACGTTCTGGA TTTCGCGCGC CCACGCCCCC TGCGGCTGCA GACGGTCGAT
CTGGCCGAAA TAGTGCGGCG CCTGCTGCAA CTGGTTGACC AACGCCTGGC CCAGTACGGC
GTTACCCCCA CCACCGATAT CGAATCGCCG CTTGAGCTTG TCTGCGACCC CGAGCAGATC
CACCAGGTGC TCTTGAATCT GGTGCTGAAC GCCATGGAGG CGATGGATGG GGTCGCCGGT
GACAGGACCC TCAAGGTCAT CGCCTACCGC AAAGAGAGCC AGGCCTACGT ACTTGTGAGC
GATTCCGGGA GGGGGATAGG CCCCGACAAG TGCGAGCAGC TGTTCGATCC CTTTTACACA
ACCAAGGTTT CAGGGGGAGG GCTTGGGTTG TCCATCCTGC AGACCATCGT CCTCTCTCAT
GGCGGGTCCG TTTCCGTGAC GGGCGGGACC GGCGCCGGCG CTACCTTTAC CGTCGTACTT
CCCCTCGCGG GGCCTTCAGG AACTGGAGAA AAAACACCGT GA
 
Protein sequence
MIELDQIGVI WYHYTIITPV TRNGLDKGTF PAGGGALQAR SSTYQEKDRY MTAFFRTFKL 
PLALLLIVGL TACAFITIRR ANNGVRAEAR ARFFEQYNRQ QYLVAELTAH SLDEMFATFS
RNLELVAGLF DGKEVDREQS QRLKVHLEKI YGSLLGTPVI DLVVFDSKGV AVAIEPHDNF
TLGRSYAWRD YYRWVRDQRQ PGRMYISPFM QLAGGRKRGV KELIVARGIY GPRGEFNGVV
ACTLDFDKLA RKHVLSVKIG KHGQAWLMDS TTRTILVDPN GRIAGQTFDE ALRRKWPRLY
DLLLSAEDGK PGSGWYEFED PADPRLKVRK LVSYHPVRLE NRLWTVGVTT PEREVEALLS
SFLQRQEAIS TTLLVTIIGG AAFLLALLYH WNRTLTAQVG LHTRALSETH SRLEATFDEL
LVAKKVAAVG HLALGLAHEI RNPLSAIQMN MQMIRKKIEP TGVLCENFSI ADGEIQRLNR
LLKDVLDFAR PRPLRLQTVD LAEIVRRLLQ LVDQRLAQYG VTPTTDIESP LELVCDPEQI
HQVLLNLVLN AMEAMDGVAG DRTLKVIAYR KESQAYVLVS DSGRGIGPDK CEQLFDPFYT
TKVSGGGLGL SILQTIVLSH GGSVSVTGGT GAGATFTVVL PLAGPSGTGE KTP