Gene Gbem_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1420 
Symbol 
ID6781407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1638124 
End bp1638699 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content64% 
IMG OID642767414 
Productpyruvate ferredoxin/flavodoxin oxidoreductase 
Protein accessionYP_002138235 
Protein GI197117808 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR03334] indolepyruvate ferredoxin oxidoreductase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAT TTAACATCGT CATTGCCGGG GTAGGGGGGC AGGGGGTGCT GATGGCTTCC 
AAGGTGCTGG CCGAAAGCGC TCTGGCTAGC AGCATGGACG TAAAGCAAAA CGAGGTTCAC
GGCATGGCGC AAAGGGGCGG GAGCGTCATC TCCTTCGTCC GCATCGGCGC CAAGGTGCAC
TCGCCGGTGG TGCTTCCGGG CACCGCCGAC ATCCTCATCT CCTTCGAGCC TTTGGAGGCG
CTGCGCTACC TGCACTACCT GAAGCCCGGC GGCAAGCTCG TCTACAACAA GGCGTGCATC
AACCCGAGTA CGGTGGCGGC GGGTCTTGCC ACCTATCCCG GCGACGTCGC GCAGCGGATA
ACAGCGGCCT GCCCCGACGC CAGGGCGATA GATGCGCTGC AGGTGGCGAA AGAAGCCGGA
AACGCCAAGG CGGTGAACAT GGTCATGGTC GGCTCGGTCA TGAAGGGGCT CCCCATTGAC
TCGGAGGTTG TGGAGGGCGT GGTCAGGGAG ATATCCCGCG GCAAGGGTGA GGACGTCAAC
ATGGCCGCGC TGCGCGGAGG AGCCGCTACG GCCTGA
 
Protein sequence
MKAFNIVIAG VGGQGVLMAS KVLAESALAS SMDVKQNEVH GMAQRGGSVI SFVRIGAKVH 
SPVVLPGTAD ILISFEPLEA LRYLHYLKPG GKLVYNKACI NPSTVAAGLA TYPGDVAQRI
TAACPDARAI DALQVAKEAG NAKAVNMVMV GSVMKGLPID SEVVEGVVRE ISRGKGEDVN
MAALRGGAAT A