| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1411 |
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| Symbol | |
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| ID | 6781398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1625118 |
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| End bp | 1627112 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642767405 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_002138226 |
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| Protein GI | 197117799 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCTTGT CGAGCGATCC TGCTGCGGAG TTTTTCCTAG GTAAATTCAG CAATTTGGAA
CAGCTGTTCG GTCAGGCCCA GTTCGGTGTC TCCATCATAG ACTGCGACCT GCGCTACATC
TACGTCAACG ACCGGATGGC GTCGATCAAC GGCGTGCCCC CAAAAGAGCA TCTGGGGAAG
ACCGTAAGGG AGGTCGACCG CTTCGTCGCT CTGGTGGTGG AGCCGTTGCT GAACCGGACC
ATCCATGAGG ATCATTCCTT CGTGGACCTT GAGATACGGC TGTCGAAACC GGGCGACCCT
CAGGAGAAAT CCTGGTTGAT CTGCTCTTAT CCCCTCAAGG AAAGCGACGG TTCCGTGACC
CGCTGCGGCC TGGTGGTTCA GGATATAACC GAGCAGAAGC TAAGGCAGAG CCTGCAGACA
GAGCGGCTGC AGGTTGAGGC CTTCCTCTCA AACCTCTCTT CCGCCTTCAT CAACGTGCCG
GTGAGCGAGG TGGATCGAAA GATAGAAAAG GCATTGCAAA AGGTCGTCAA CTTCCTCGGT
TTCGAAAGAA GCAGCATCTG GCACTTCACC CCTGATCGCA GTAGTTTGCG CATCACTCAT
TCCTACGCGC TCCCCGGCGT CAAGCCACCC CCCACAGAAT TGATGAACCT GATCCCGATA
TGGATCGAGA TGATCCAGCT TGGGGAGAGC TTCCGCGTCT CCGACGTTGA GGAGCTGTCG
GACAAGTTTT GGAGGGAAAA ACAATACTGC AAGGACCAGG GCGGCATCAA GTCCATCATG
TTCATTCCCG CCAGTGTCGG CGGCACCATA GTCGGCGCCA TCACCTTCGT TTCCTACAGC
GTCAAGAAAG AGTGGCCCGA CGAGCTGACT CAGAGGCTCC GCCTTTTATG GGAAGTTTTC
GCCAACGCCC TCGAGCGTAA GAGGGCCGAT CAGAAAATCC AGAACGCCCT GGCGGAAATA
CGACAGCTGA AAGACCGCCT GGAGGCGGAA AACGTCTATC TGCGCGACCA GATCGACGTG
GAATATAAGC ACGAGGAGAT CATCGGCAAA TCGGAGGCGA TAAGAAACGT GCTGCAGCAG
ATACAGCAGG TGGCGCCAAC CGATTCCACT GTGCTCATCC TGGGCGAAAC CGGCACCGGC
AAGGAACTGA TAGCGAGGGC GATCCACAAC GCCGGCCAGC GCAAGGCACG CGCCATGATC
AAGGTGAACT GCGCCGCATT GCCGGCAGCC CTCATCGAGG CGGAGCTGTT CGGTCACGAA
AAAGGGGCCT ATACCGGAGC CGTATCCTCC CAGATCGGGC GCTTCGAGGC GGCTAACGGA
TCGACCATCT TCCTGGACGA GATAGGGGAG CTCCCCCTGG AGCTGCAGTC GAAGCTGCTG
CGGGTCATCC AGGAAGGGCA ATTCGAGCGC CTGGGAAATT CGAAGCCGGT CAAGGCGGAT
GTGAGGGTGA TCGCCGCGAC CAACGTGAGC CTGAAGCAGG CAGTGAAGGA AGGAAAATTC
CGGGAGGACC TATATTACAG GCTCAACGTC TTCCCTATTT TCGTCCCCCC GCTGCGCGAC
CGGCAGGAGG ACATACCGCT GTTGGTATGG GCGATGGTGG AGGAGTTCTC CAAGGTTTTC
GGCAAGACCA TCGAGCGCAT TCCCAGGAAA AACATGGAGA TCATGGAGCG CTACTTGTGG
CCGGGAAACA TAAGGGAGCT GAGAAACCTG GTGGAACGGG CCATGATCCT CAGTAACGGC
GGCACCCTGG TGGTGGACAT TCTGGATGGA TCCGCCGCGG CCGCAAACGA GCCGATGACG
ATGGAGGCCG CGGAAAGAAA GCATATAGGC TTCATACTGG AAAAGACGGG GTGGCGCATC
CGCGGCAAGG GTGGCGCGGC CGAAATTCTC GACATGAAAC CCACCACGCT GCATTCCCGG
ATCAAGAAAC TCGGCGTCAA AAGGAAGAAC GGAACGCTCG AACCGCCCCC CGCTGCAGAG
AAACCAACTT CCTGA
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| Protein sequence | MALSSDPAAE FFLGKFSNLE QLFGQAQFGV SIIDCDLRYI YVNDRMASIN GVPPKEHLGK
TVREVDRFVA LVVEPLLNRT IHEDHSFVDL EIRLSKPGDP QEKSWLICSY PLKESDGSVT
RCGLVVQDIT EQKLRQSLQT ERLQVEAFLS NLSSAFINVP VSEVDRKIEK ALQKVVNFLG
FERSSIWHFT PDRSSLRITH SYALPGVKPP PTELMNLIPI WIEMIQLGES FRVSDVEELS
DKFWREKQYC KDQGGIKSIM FIPASVGGTI VGAITFVSYS VKKEWPDELT QRLRLLWEVF
ANALERKRAD QKIQNALAEI RQLKDRLEAE NVYLRDQIDV EYKHEEIIGK SEAIRNVLQQ
IQQVAPTDST VLILGETGTG KELIARAIHN AGQRKARAMI KVNCAALPAA LIEAELFGHE
KGAYTGAVSS QIGRFEAANG STIFLDEIGE LPLELQSKLL RVIQEGQFER LGNSKPVKAD
VRVIAATNVS LKQAVKEGKF REDLYYRLNV FPIFVPPLRD RQEDIPLLVW AMVEEFSKVF
GKTIERIPRK NMEIMERYLW PGNIRELRNL VERAMILSNG GTLVVDILDG SAAAANEPMT
MEAAERKHIG FILEKTGWRI RGKGGAAEIL DMKPTTLHSR IKKLGVKRKN GTLEPPPAAE
KPTS
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