| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1403 |
|---|
| Symbol | |
|---|
| ID | 6781390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1616669 |
|---|
| End bp | 1617481 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642767397 |
|---|
| Product | methyltransferase |
|---|
| Protein accession | YP_002138218 |
|---|
| Protein GI | 197117791 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR00740] methyltransferase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.133547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCG GCAAACCAGT TAATCTTCGA CTTTCTTTTT TTGCCCAACA CCCCAGCTCG
AAAAAGGACA AGAAGAAGGT GACCAGAAAA ACCGACGATA TCTTTGCTGC GCCTCTGCAG
GAAATGATCG ATTTTAAATT CGATGAACGC GTAGTCGCAG TCTTTCCCGA CATGATACAA
CGCTCGGTCC CCGGTTACGG GATGATCATA TCCAACATCG GCATCCTCGC CGCCAAGTAC
GCCCAGGCCG GAAGTCACTG CTACGATCTC GGCTGCTCCC TCGGGGCCGC TACCCTCTCC
ATGCGCCAGC GAATCAGCCA GCCCAACTGC GACATAATCG CCGTCGACAA CTCCCCGGCC
ATGATCGAGC GCGGCCGTGA ACTCCTGGCA CGCGATTCCC AGCCGACCGT CCCGGTGGCG
CTGATCTGTG CCAATATCCA GGACGTCGTC ATCGAGAACG CCTCGGTCGT CGTCCTAAAC
TTCACCCTGC AGTTCATTCC CCCGGAGCAA CGTCTGGCCC TGATCAAGCG GATCCATGCC
GGGCTCAGGC CGGGCGGCAT CCTCATCCTC TCCGAAAAGA TAGCTTTCAG CGAGCCGGCG
CGGCAGCACT TTCACGTAGA AATGCATCAC GACTTCAAAC GGGCCAACGG TTACAGCGAT
ATGGAGATCA GCCAAAAGCG GTCGGCGCTG GAAAACGTGA TGATCCCGGA GACCGTCGCC
TGCCACCAGG AGCGGCTGCT GCAGGCTGGC TTCTCCTCCT CCGAGCTTTG GTTCCAGTGC
TTCAACTTCG CCTCCATGGT CGCATTTAAA TGA
|
|---|
| Protein sequence | MFRGKPVNLR LSFFAQHPSS KKDKKKVTRK TDDIFAAPLQ EMIDFKFDER VVAVFPDMIQ
RSVPGYGMII SNIGILAAKY AQAGSHCYDL GCSLGAATLS MRQRISQPNC DIIAVDNSPA
MIERGRELLA RDSQPTVPVA LICANIQDVV IENASVVVLN FTLQFIPPEQ RLALIKRIHA
GLRPGGILIL SEKIAFSEPA RQHFHVEMHH DFKRANGYSD MEISQKRSAL ENVMIPETVA
CHQERLLQAG FSSSELWFQC FNFASMVAFK
|
|---|
| |