| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1397 |
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| Symbol | |
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| ID | 6781384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1610121 |
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| End bp | 1611572 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642767391 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002138212 |
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| Protein GI | 197117785 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0470639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGCGC TGCGCGGTCG CATCTTTGCC GCCGCACTCT GCCTCCTCCT TGCGGGGTGC
GCGGTTTCGG CCGACTATCG GCCCCCGAGG CCGGACCTGC CGCCACGCTG GAGCATGGGG
GAGGAAGCCG GTGCCCCGCT CGTGACGGCG GAAACCCCCT GGTGGACCGC ATTCGGAGAT
CCCCTGCTCA ACGCTTTGAT CGATCGCGCT CTGCGGGCGA ACCCGGATGT GAGGCTGGCT
GAAGCACGGG TCCTGGAAGC ACGGGCCCGC AGGGGAGCGG CAACGGGTTC CTTGGCCCCC
TCGCTTGATG CCAGGGGCTC CTTTACCAGG GAAAGGGAGA GCAGGAACGC GCCCAACCCC
GTGCTGGTGC GACCGGGCGG GGAGGTGGAG CCTCCAGGGA CGGAGAACCT CTTCCAGGCC
GGTTTCGATG CCAGTTGGGA ACTCGACCTT TTCGGCGGCA AGCGTCGGGC GGTCGAGGCG
GTGCAGGCCG ATCTCGAGTC GGCGCTCTAC GAGCGCGGGG GCGTCGTCCT TACTTTAGTC
GCGGAGGTGT CGAGAAACTA CTTCGAATTG CGGGGAATCC AAAGGCAAAG CCGTCTCGCA
GCCACGAGCG TCGCCGTCCA GAGGGACAGC CTCGCCTTGC TTCGCGCGCG ATTTGCCGCC
GGGATGGCAA CCGATCTCGA GGTCGTGCGG GCAGAGGCAG AGGTCGAGCG GAGAGCCTCG
CTGCTACCAT CGCTAGACTT TTCCTACCGG AAAGCGCTGC ACCGTCTGGG CGTGCTCCTG
GGCGAGGCCC CAGGTGCATT TGCCGGCGAA CTGCAACCGG AAAGCATCAT CCCCGTCCCC
TCTGGCATGC CGCCTGTCGG GGCGCCATCG GATATCCTGC GCCAGCGGCC CGACTTGCGC
AGGGCCGAGA GGCAGCTAGC CGCAGCGTCG GCCAGGGTGG GGGTCGCGAA AGCTGATCTC
TACCCGAGGT TCGTCGTGTC GGGTTCTCTC GCCCTGGCTA GCGAGGAGTT TGGCGATTTC
TCCGACCGCG GCAGCGTGTT GTGGTCGATC GGTCCCTCCA TCATCTGGCC GATCTTCCAG
CGCGGCAGGA TCGTGGCCAG GATCGAGGTG CGCGACGCCC AAGAGCAGCA GGCATTGATC
GCGTACCGGC GGGTGATCCT GGACGCCCTG GAGGATATGG AGAATGCCCT TGCCGGGTAC
CGGGATGAAG CGGACAGGCG CGCAGCTCTG ATAAAGGCGG TGGACGCAGA TAGGCGTAAT
GTCGTTTTCG CACGTGGGCG GTACCAGGGC GGGCTCACGG ACTTCCGTGA GGTGCTCGTG
GCTGAGAGCA ACCTGTTACA GGCGCAAGGC GAGCTGGCTC AGAGCGAGAC CAACCTTTTG
CTCGCCCTGG TTGCTTTGTA CAAGGCGCTA GGCGGGGGAT GGAGCGTTCC AGCCGGGGAG
GGGGGTGAGT GA
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| Protein sequence | MTALRGRIFA AALCLLLAGC AVSADYRPPR PDLPPRWSMG EEAGAPLVTA ETPWWTAFGD
PLLNALIDRA LRANPDVRLA EARVLEARAR RGAATGSLAP SLDARGSFTR ERESRNAPNP
VLVRPGGEVE PPGTENLFQA GFDASWELDL FGGKRRAVEA VQADLESALY ERGGVVLTLV
AEVSRNYFEL RGIQRQSRLA ATSVAVQRDS LALLRARFAA GMATDLEVVR AEAEVERRAS
LLPSLDFSYR KALHRLGVLL GEAPGAFAGE LQPESIIPVP SGMPPVGAPS DILRQRPDLR
RAERQLAAAS ARVGVAKADL YPRFVVSGSL ALASEEFGDF SDRGSVLWSI GPSIIWPIFQ
RGRIVARIEV RDAQEQQALI AYRRVILDAL EDMENALAGY RDEADRRAAL IKAVDADRRN
VVFARGRYQG GLTDFREVLV AESNLLQAQG ELAQSETNLL LALVALYKAL GGGWSVPAGE
GGE
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