Gene Gbem_1382 details

Gene Information

• Locus tag: Gbem_1382
• ID: 6781369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 1598421
• End bp: 1599026
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642767376
• Product: CheD, stimulates methylation of MCP proteins
• Protein accession: YP_002138197
• Protein GI: 197117770
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00327904
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGATCG TGAAGATTGA AGAGTATCAA AAAGGGGAGC GGGTGACCAT CTCCCCTGGC 
GAATATTATG TGACGGCAAA GCCGGGGGTG ATCTCCACTT TGCTCGGCTC CTGCATCGCC 
GTCTGCCTCT ATGACCGCGG GCGGCGCCTG ATCGGGATGA ACCACTTCAT GCTGAGCAAC 
CCCCGCTACT CCAGGGATCT GCCGTTGAAC ACCACGGACG CGGGGCGCTA TGGGATCCAC 
GCCATGGACC TGCTGATCAA CGCCATGATG AAGAAGGGCA CCTGCCGTCA CGAGCTGCGG 
GCCAAGGTCT TCGGCGGCGC CACCATCATC AACCCGGATT CGCCGCACGA CAACTTCTTC 
TGCGTGGGAC AGGTGAACTG CAGGTTCATC CTGCAGTACC TGGAGAAGGA GGCGATACCG 
GTCGACGCCA TGGACCTGGG GGGAGACTTC GGCCGGGTGA TCCACTTCTC CAACGGGGAT 
TTCGCGGTGC ACCGCAGGAA AGTGGATTCG CTTCGCAGCG ACAAGCTGGC CAAGCGCGAC 
CGGTACTGCT GGCAAACGGC GATCGAGCAG CAGCAAGCCG CCCTCACCGA GATCGACCTT 
TGGTAA 

 

Protein sequence

MRIVKIEEYQ KGERVTISPG EYYVTAKPGV ISTLLGSCIA VCLYDRGRRL IGMNHFMLSN 
PRYSRDLPLN TTDAGRYGIH AMDLLINAMM KKGTCRHELR AKVFGGATII NPDSPHDNFF 
CVGQVNCRFI LQYLEKEAIP VDAMDLGGDF GRVIHFSNGD FAVHRRKVDS LRSDKLAKRD 
RYCWQTAIEQ QQAALTEIDL W