| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1379 |
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| Symbol | |
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| ID | 6781366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1593655 |
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| End bp | 1595790 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642767373 |
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| Product | transketolase |
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| Protein accession | YP_002138194 |
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| Protein GI | 197117767 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.356531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCG AATTAAATCC GGGCAGCGCC GGGAACCTGG ACCAGCTCTG CATCAACACC
TTGCGTTTCC TGGCGGTGGA CGCCATCCAA GAAGCCAACA GTGGCCATCC CGGCATGCCG
ATGGGGGCAG CCCCCATGGC ATACCTGCTC TGGACCCGAT TCCTGAGGCA CAATCCCGCC
TCCCCGGGTT GGTTCGACCG GGACCGCTTC GTCCTCTCCG CGGGGCATGG CTCCATGCTG
CTTTACTCCC TGCTGCACCT GACCGGCTAC GACCTCCCCC TGTCGGAGCT GAAACGCTTC
CGACAGTGGG GAAGCCGCAC CCCCGGACAC CCGGAGCGGG GGCTTACTCC GGGGGTAGAG
CTGACCACCG GGCCTTTGGG GCAGGGGTTC GCCGGCGCCG TCGGCATGGC GATAGCAGAA
TCCCATCTTG CCGCCCGCTA TAACCGGCCG GGGTTCACGC TCGTGGACCA CTTCACCTAC
GCCCTTGTCG GTGACGGCGA CCTCATGGAA GGGGTGGCGG CCGAGGCGGC CTCGCTTGCC
GGGCACCTGC GCCTTGCAAA GCTCATCTGC CTATACGACG ACAACCGCAT CACGCTCGCC
GCCGCAACCG ATCTGAGCTT CACCGAGGAC CGCGGCGCGC GCTTCAGGGC CTACGGCTGG
CAGGTGCTCG AGGTTGCCGA CGGCAACGAT CCGGAGGCGA TCGGGTGGGC CTTGGAGGAG
GCGCGGGCGG AAAAAGAGCG CCCCTCCCTG GTCATGGTGC GCACCCGGAT CGGGTTCGGC
TCGCCGCAGA AACAGGACAG CTTCGAGGCG CACGGCGCAC CCCTTGGGGT GGAGGAGGTG
CGCCGCACCA AGGATGCGCT CGGATGGCCG CAGGAGCCGC AGTTCCACAT CCCGCCCGAG
GCGCTGGCGC GGTTTCGCGA GGCGCTGGTG AAAGGCGCCG TGGAGGAGCG GGCCTGGGAG
TCGGTCATGG CGGGTTACGA CGCGGCGTAC CCGGCTGAGA GCGCCGAACT GACGCAGGTT
CTGGCTGGGG AGCTGCCGCA GGGGTGGCAG GAGGCTCTGC CGGAATTCCC CGCCGACGCC
AAGGGGATGG CGACGCGGGT AGCCTCGGCA AAGGTGCTGA ACGCCTTGGC CCAGAGGGTG
CCGCAACTTT TCGGCGGCTC CGCCGACTTG AACCCCTCGA CGCTCACCGC GCTCGCCGGC
AAGGGCGACT TCCAGCCCGA AAGCTTCGAC CCGCTGGACA GGCAGGGGGC GGTGGGGGGG
GCATGGGGGC GCGCCGGGGC GAACCTGCAC TTCGGCGTCC GCGAGCACGC CATGGGGGCC
ATCCTGAACG GAATGGCGGC GCACGGCGGC ACGCTTCCCT ACGGCGCCAC CTTCCTCACC
TTCTCCGATT ATCTCCGCCC CGTGCTCAGG CTGGCGGCGC TGTCGCGGCT CAAGGTGATC
CACATCTTCA CCCACGACTC CATAGCGCTG GGGGAGGACG GGCCGACCCA CCAGCCGGTG
GAACAGCTGG CTTCCCTGCG CGCCATCCCG CGCCTGGTGG TATTTAGGCC TGGGGACGCC
AACGAGTGCG TTGAGGCCTG GCGCGCGGCG CTCCAGGTCG AGGGGCGGCC GGTGGCCCTC
GTGCTCTCGC GCCAGGCGCT GCCCACTTTG GACCGTGGGG AGCTGGGCGC GGCGGCGGGG
GTGCTCCGGG GAGGCTACGT CCTCGCCGAG GCGCGGCAGG GGGCGCCTCG CCTGATCCTC
ATCGCCACTG GATCCGAGCT TTCCCTGGCC CTGGCTGCGC GCAATTCGCT TGAGGAGCGC
GGCCTCGCGG TCCGCGTCGT CTCTCTCCCC AGTTGGGAGC TCTTCGACGA GCAGCCGCAG
GAGTACCGGG ACTTCGTGCT GCCGCCTACG ATGACGGCGC GGCTGGCGAT CGAGGCGGGG
GCGACCCAGG GATGGCACCG CTACCTGGGG TCGGGGGGGA TAGTCTTGGG AGTCGACGAT
TTCGGGGCCT CTGCCCCGGG AGAGGTCGTC TTGAGGGAGT ATGGTTTCAC CGTGGACCAT
GTTTGTGGCA TGGCGCTGCA ATTGACAGGG GGCGCGGGCC CCGGCCTGGG CGCGGCGCCC
GAAAAACCGC CGGAGGCACC CTCTCCGAAA CCGTAG
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| Protein sequence | MTIELNPGSA GNLDQLCINT LRFLAVDAIQ EANSGHPGMP MGAAPMAYLL WTRFLRHNPA
SPGWFDRDRF VLSAGHGSML LYSLLHLTGY DLPLSELKRF RQWGSRTPGH PERGLTPGVE
LTTGPLGQGF AGAVGMAIAE SHLAARYNRP GFTLVDHFTY ALVGDGDLME GVAAEAASLA
GHLRLAKLIC LYDDNRITLA AATDLSFTED RGARFRAYGW QVLEVADGND PEAIGWALEE
ARAEKERPSL VMVRTRIGFG SPQKQDSFEA HGAPLGVEEV RRTKDALGWP QEPQFHIPPE
ALARFREALV KGAVEERAWE SVMAGYDAAY PAESAELTQV LAGELPQGWQ EALPEFPADA
KGMATRVASA KVLNALAQRV PQLFGGSADL NPSTLTALAG KGDFQPESFD PLDRQGAVGG
AWGRAGANLH FGVREHAMGA ILNGMAAHGG TLPYGATFLT FSDYLRPVLR LAALSRLKVI
HIFTHDSIAL GEDGPTHQPV EQLASLRAIP RLVVFRPGDA NECVEAWRAA LQVEGRPVAL
VLSRQALPTL DRGELGAAAG VLRGGYVLAE ARQGAPRLIL IATGSELSLA LAARNSLEER
GLAVRVVSLP SWELFDEQPQ EYRDFVLPPT MTARLAIEAG ATQGWHRYLG SGGIVLGVDD
FGASAPGEVV LREYGFTVDH VCGMALQLTG GAGPGLGAAP EKPPEAPSPK P
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