Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1376 |
Symbol | |
ID | 6781363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1590785 |
End bp | 1592191 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642767370 |
Product | OmpA/MotB domain protein |
Protein accession | YP_002138191 |
Protein GI | 197117764 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000480584 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAC TCACCAGCAT TATCTGTCTA ATGGCCTTGG CCGTGATGGC GCTAGCCAGC ATCGCGCAGG CCGGGGAAAG AGCGGGGGCG TTTTCCATCT CCCCCTTTGT CGGCGGCTAC GGGTTCGATG ACGACCGCCA AGCCTATTTC AAGCAGAACC GCCCGTTAGG CGGCTTGCGA TTGGGTTACG ACTTCACCGA TCACTTCGCG GCGGAACTGG TCGGTACTTA CATGAAGGCT GAGTACAAGG CAACCAAACA CAACGTCGGC GTCTACTCGT ACCGCCTCGA CCTCGTCTAC AACATCCTCG CTGACTCTCA GGTCGTTCCC TATCTAGCAT TCGGCGGCGG TGGGACCACC ATCAGGGACG AACGCGGCAA CTCCCATGAT GGCACCGCCG AAGCGGGCGG CGGCGTCAAG TTCTTCATGA CCGACAACGT GGCCCTCAGG GCAGACGGGC GCTATCTCGT CGATTTCATG TCCAACCACC TGAGTCGCGG CCGTGACCTT GCCCGTAACT GGGAATACTC CCTCGGCTTG ACCTTCCTGT TCGGCGGCAG GGAGCGCGCT GCGGCTCCCG CCGAGACCGT TGCCACTCCA GTCGAGCAGC CCGCTGCGGT TACCCCTGCC CCCGAGCCCC CGCTTGAGGT TCCGGCAGCC GAGCCGACCC CTGATCACTA CAAGTATTGC ATCACCCTGC ATGGTGAGTT CGACATCGAC AAGGCCATCA TCCGCCCTGA ATACAAGGAG GAGATCGCCC AGGTCGGCAA CTTCATGAAA AAGTACCCGA CCACCACGGC CGTCATCGAA GGGCACACCG ATAACGTCGG CTCCTACAAT CACAACCAGG ATCTCTCCCA GCGCCGCGCC GAGGCGGTGG TGAACTACCT GGTCGAGCAG TACGGGATCG AGCGTTCCCG TCTTTCCGCC AAGGGGTACG GTTTCACCCG CCCCATCGCC GACAACGCGA CCGACGAGGG TAAACAGAAA AACCGCCGCA TCGAGGCGAT CATCGACTGC GCCTTCGACG TGCAGCAGGT TACTCCGCCG GACAGGCTCT GCATGGCGCT GGTGCTGGAT TTCGATGCCG GCAAGGCGGA CGTGAAGTCG CAGTACCGCA ACGAGATCGC CAAGGTGGCT GACTACATGA AGCGCTACAA CACCACCACC GCCGTGATCG AGGGGCATAC CGACAACACC GGCTCCCCCG AAAAGAACAT GAAGCTCTCG CAGCAGCGCG CCCAGAACGT GGTCAACTAC CTGGTGGACA ACTTCGGCAT CGAGCGCTCC CGCCTTTCCG CCAAGGGGTA CGGCGCGACC CGCCGCATCA GCTACAACAA CACGCCCGAA GGGCGCCAGA AAAACCGCAG GATCAACGCG GTCATCGACT GCGTCGTCAC GAAGTAG
|
Protein sequence | MKKLTSIICL MALAVMALAS IAQAGERAGA FSISPFVGGY GFDDDRQAYF KQNRPLGGLR LGYDFTDHFA AELVGTYMKA EYKATKHNVG VYSYRLDLVY NILADSQVVP YLAFGGGGTT IRDERGNSHD GTAEAGGGVK FFMTDNVALR ADGRYLVDFM SNHLSRGRDL ARNWEYSLGL TFLFGGRERA AAPAETVATP VEQPAAVTPA PEPPLEVPAA EPTPDHYKYC ITLHGEFDID KAIIRPEYKE EIAQVGNFMK KYPTTTAVIE GHTDNVGSYN HNQDLSQRRA EAVVNYLVEQ YGIERSRLSA KGYGFTRPIA DNATDEGKQK NRRIEAIIDC AFDVQQVTPP DRLCMALVLD FDAGKADVKS QYRNEIAKVA DYMKRYNTTT AVIEGHTDNT GSPEKNMKLS QQRAQNVVNY LVDNFGIERS RLSAKGYGAT RRISYNNTPE GRQKNRRINA VIDCVVTK
|
| |