| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1371 |
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| Symbol | |
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| ID | 6781358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1582707 |
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| End bp | 1587473 |
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| Gene Length | 4767 bp |
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| Protein Length | 1588 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642767365 |
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| Product | hypothetical protein |
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| Protein accession | YP_002138186 |
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| Protein GI | 197117759 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02608] delta-60 repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCAA GACCGCTTTT GCTCCTGCTG GTCGCACTTA TTCTCTCGCT TTTCGCCGGC
CGCGCCCAAG CCGCCGTCTC GTCCCTGCGT GACGGCTTCG ACATCTACAG CAGCGTCAAG
ATAAGCGGCG CCGGGATCCG CTCCGTCGCG GTGCAGCCGT GGGACGGCAA GGTGATCATC
GGCGGCTCCT TCACCCTGAC CGGCGGCACT CCCGTGACCA CCAGGGTCAA TCTGGCCCGG
TTGAACCCGG ACGGCACCCT CGATACCACC CTCAATTACA ATCCCCAAGG GAGCGTGAAC
GCCATCGCCA TCCAGTGGAA CCAGGCGAAT TCCGCCTTGA GCTCCATCTT CATCGGCGGG
GCGTTCGCCA AGATCGCCAC GCCTGAAGGG GACTTGGATC GCAATGCCTT GGCGCGGATA
AGAAGCGGCG ACGGCTTTCT AGAGGACTTC GATCCTATCA CCTCGGCCGC GGCCGTAGTG
AACGCGCTGG TCCTCCCCCA AGGCTCCAGC GACATCGTCG TCGGCGGGAG CTTCAGCCAG
GTCTCCCACA CCGCCCCGTG CAGCAACATC GCCAAAATCT CGCTCGCCGA CGGGACCCTT
AAATCCAGCT TTTCGGGGGG GGTAAGCGGC GGCCAGGTCT TCGCCATCGC GCTGCAAAAC
GGGAAGGTGG TGGCGGGCGG GAGCTTCACA GGGAGCGCCG GGTACCTGGC CCGTTTCACC
AGCGCCGGTT TACCCGATCC CAGCTTCAGC GCCTATCCCG ACGGGCCGGT ACGGGCGCTG
GCGGTGCAGG TGGACGGCCG GCTGGTGCTA GGGGGGGATT TCACCGGTAT CCATATCGGC
CCGGGGAGGG TATTCCACCC CCGCGAGCAC CTGGCGCGCA CCGCGGGCGA CGGGACCATA
GACGATTTCA ATCCCGCTCC CGACGGCGGC GTCGCCGCCG TGGCGCTGCA GCCGGACGGC
AAGATCGTCA TCGGCGGGGA ATTCACCAAG ATAGCTAAAC CCGGCCCTGC CCTCCCTGCT
TCCTCCCGCA ACCATGCGGC CCGCCTCAAT ATCGACGGCA CCCTCGACGG TTTCGACCCC
GCCCCGGACC TGAAGGTGGC AGCCGCCCTG GTGCAGTTGG ATGGCAAGAT CCTTATCGCC
GGCGACTTCG ATAATGTAGC AGGCGCCCCC CGCACCAAGC TGGCCCGGTT TTACCCCGAG
GGGCATCTCG ATGAGGATGC GGTCGCGATC GGAACCAAGA TAGTCTCGCT CATGGATACC
GCCGACATTG GCGCCAACAT CCTCACCTTC TACGCCCACC CGGACGGGAA AATGGACATA
GGCGGACTCT TCAGCAACGT AGACGGCACA CTCAGAAACC GTTTCGCCAG GCTGGAAAAG
GACTGGAGCC TCGACTTGGA TCCGCCGGGA AACCTGAAGC TGAACAACGG CGTCCTGGTG
ATAGCGCCCT ATCTGAACGG GGACATTCTC GTTGCAGGGC AATTCGGCGC CATGAACGGG
GCGCCGCAAA ACCAGGTGTT CCGCCTTAAA TCGAACGGCG ATCTCGACTT AGATTTCAAT
GCCAAGATGA ACCTGTTGAT CGCGGGAGAG GTTATGCCCG GCCTGCAGAT GGCCCGCGCA
GTCGGGATGA CGCCGACGGG CGATACGCTC CCGGACCAAA CGCCGAAGAT GGATATCTTC
ATCGCAGGCG GCAGCTCCGA CCCCGCATAT GACGAATTCG GCGCCGAGCT GAACCCTCGT
TTTTTCCTGG CGAAAGTGGA CCACGCGGGC GATCTCGACG CCGCCTTCGC GGCAAACGTG
TACGCCTTGC CCCCCTCCCT GATCGGCGGG GAGATCACGG CTTTGACGGT GCAGGGGCGG
AAGGTCGTGA TCGGGACCAC CGAAGGGGTG GTGCTGCGCC TGAACGAAAA CGGGACCCAG
GACGAAAGCT TTAACGAACT GCAGCTCGGC TCCGGCATGA TCAACACCAT CCAGCAGACC
GCCGACGGCA AACTGATGGT GGCCGGCACC TTCACCTCCA CCTATACCGG CCCCGACGGC
AAGAGCTGGA AAAGGCACAT CCTCAGGATC GATAACAACG GCGCCATAGA CAACACCTTC
AACGTCGAAA CCACATACAT CAGGCCTGAC GGGAGGGAGC TCACCGGCTC CTTCTACGCC
ATCGCCGTGC AGACCGACGG CAACATGGTC GTGTCCGGGA ACTTCAACAC GGTCAGAGAC
GGCAAGGAAA CTACGGCTGC GAGATGGCAC ATCTCCCGCC TGACCCCGGA GGGGGTGCTC
GACCCGGACT TCGACTACGG CTTCCTCGGC GGCAAGAGGG CCGATTACAA CCTCAACATG
GTGAATGCAG TCGGCAAGCA GCTCGACGGC AAGCTGGTGA TGGCGGGCGC TTTCCGCAGC
ATCGGCGACG ATATCGAGAA GAGGGTTTTG GAGCGCTTCA GCGACGGGTG GGCGCCGCAA
GAGGTGGCGG TACAGCCGGA CGGCAAGGCG GTGCGCTGGG AGCGGCGCGG GACGGGCCCG
GAATTTGCCC GGGTGACCTT CGAGCATTCT CCGGACGGCG TGGAGTGGCT CCCCCTGGGG
CCGGCTGAGA GGGTCGCCGG GACGGCGAAC TGGGAGCTCT CCGGAAACGG CTTCGACCTC
GGCGCTTCGG GTACGCTTGC CACCCGTTTC CTGCGCGCCC GGGGGTACAT GACCAACCAC
AGGGGCGGGG CCGGCCCGAT CATGGAAACC ATCCGGGTTT TCTATCTCAA CCCGGCGCCG
GTCAAGCAGG AGCAGACCAT CGATCCCGGC GATTTCAGCG ACAAGACCTA CGGCGACCCC
GACTTCGACC CGGGCGGAAG CTCAACCAGC GGCCTGCCGC TGACCTACAC CAGTTCCGAC
CCCGGGGTCG CCGTTGCGGT CGGGGGAGAG ATACAGATCA CCGGCGCCGG GACCGCCACC
ATCACGGTTT CGCAGGGGGG GGACGACAGC TTTGAGCCCG CGGAAGATGT CACCGTCTCC
TTTACCGTCG CCAAGGCTCC GCTTCGCGTC GTCGCCGACG ACAAGGTCCG CGCTTTCCTG
ACGCCCAACC CCGCGCTCAG CGCGAGTTAC CTTGGGTTCG TCAAGGGGGA AGGGGTGTCG
GTTCTTTCGG GGAGCCCCTC GCTCTCGACC GCGGCCTTAT TTGAGAGCAG CGTCGGGGAG
TATGCCATCG CGGCCGCCCT GGGGACGCTC TCTTCGCAAA ACTACCGTTT CCTGCCGGTC
GACGGCACGT TGCGCATCTT CAGGTCCTGC CAGGAGATCT ACTTCCCCCC CATACCGGAG
CGGACCTTCG GCGACCCCCC CTTTACTATT GTCGCCTCGG CCTGCAGCGG ACTCACCTTG
AGCTTTGCGA GCTCGGATCG TGAGGTGGCG CAGGTGAACG GGCAGACAGT CACCATAACC
GGCGCTGGAA GCGCGGTGAT CACCGTGTCG CAGCCGGGGA CCGGGAGCCT GGAACCGGCG
CCCGAAAGGT TGCAGCCCCT GGTGGTGCAC AAGAGCGGGC AGGGGGTCTC CTTTTCCTCG
CTGGCCCAGA AGGTGGTGGG GGATCCCCCC TTTCCCCTCC AGGCAAGTGC CACTAGCGCC
CTTCCCGTGA GCTACGCGAG TTCCGATCCC CTGGTCGCCG AAGTGACCGG GAACATGGTC
ACCATCGTCG GGGCGGGGAC CTGCGTCATC ACCGCGCGGC AAACAGGCAA CAACGACTTC
GAGCCCGCTC TCCCGGTTTC CCAGCCGCTG ACCGTAGCCA GCGAGGGGGT GGCGCCGGAG
CTCTCCCTCT CCACGCTCTC GGACGGGGCC GTGACCTCGA ACCCGGTGCT GAGCCTCATG
GGAAAAGCAT CCGACCTCTC CGGCATCGCC ACCCTCACGG TGAACGGGGA GGAAGTGACC
GCCGAGGCGG CATCTTTCAG CTCCGCCGTC GTTCTCGCCC CCGGGTCCAA CTCGGTCAGC
GTCTCCGCCC TCGACCGTGC CGGGAACCGG ACCACCCGGA CCCTCAACAT CACGCTTGCC
CCCCTGGCGC CGGTGATCTC GGTGGTTTTC CCGGCGGACA ATAGCGTCAC CGACACCCCC
TCCTGCGCCG TGAAAGGGAG CGTCACCCCG GGGAGCGCGG TCACCCTCTG GTTGAACGGG
TCGTCGCCGC AGTTGCTGGG GGTGGAGCAA GGTAGCTTCA CCGGCAGCGC CTACCTTTCC
GAAGGGGTGA ACACCATCGA GATCTCGGCC GAGCTCTCCG GGCGGAGTTC ACGGGTGAAG
CGGAGCGTGA CGTTATCGCC GGGCGGACCT GCCATAGCGA TCACAGAGCC GGCACAGGAC
CTGCGCACCG AGCGGCAGTC GCTCACCATC CGCGGCAGCA CGACCCTGCA GCAGCCGGGG
AGCGTCACCC TCGAGGTGGA TGGGGTGCCG TTCACCCCGC TGATCTCGGC GGGTGGGTTC
GAGCAGCAGG TGACGCTTTC ACGGACCGGC GTGATCCGTA TCAGGGCCAG GGGGGGAGGC
GGAGCGGGAG AATCGGTCGT GGCGCAGAGG AACCTGATCC GGGTCGAGAT GATACCGGGG
GACCTGGACG GCAACGGCAG CGTCGACCTG CAGGACGCTG CCCGGCTGCT GAGGGGATCG
CTGGGGCTAG AGCCCATGAG CGCGGAGCTT TTCGCACGCG GCGACCTGGC CCCGCTGGTG
AACGGAATTC CGCAGCCCGA CGGTGTCGTC GATGTGGGCG ACGTCCTTGT GCTGCTGCGC
AGGATCGTCG GGCTGGTCGA TTTCTAG
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| Protein sequence | MKPRPLLLLL VALILSLFAG RAQAAVSSLR DGFDIYSSVK ISGAGIRSVA VQPWDGKVII
GGSFTLTGGT PVTTRVNLAR LNPDGTLDTT LNYNPQGSVN AIAIQWNQAN SALSSIFIGG
AFAKIATPEG DLDRNALARI RSGDGFLEDF DPITSAAAVV NALVLPQGSS DIVVGGSFSQ
VSHTAPCSNI AKISLADGTL KSSFSGGVSG GQVFAIALQN GKVVAGGSFT GSAGYLARFT
SAGLPDPSFS AYPDGPVRAL AVQVDGRLVL GGDFTGIHIG PGRVFHPREH LARTAGDGTI
DDFNPAPDGG VAAVALQPDG KIVIGGEFTK IAKPGPALPA SSRNHAARLN IDGTLDGFDP
APDLKVAAAL VQLDGKILIA GDFDNVAGAP RTKLARFYPE GHLDEDAVAI GTKIVSLMDT
ADIGANILTF YAHPDGKMDI GGLFSNVDGT LRNRFARLEK DWSLDLDPPG NLKLNNGVLV
IAPYLNGDIL VAGQFGAMNG APQNQVFRLK SNGDLDLDFN AKMNLLIAGE VMPGLQMARA
VGMTPTGDTL PDQTPKMDIF IAGGSSDPAY DEFGAELNPR FFLAKVDHAG DLDAAFAANV
YALPPSLIGG EITALTVQGR KVVIGTTEGV VLRLNENGTQ DESFNELQLG SGMINTIQQT
ADGKLMVAGT FTSTYTGPDG KSWKRHILRI DNNGAIDNTF NVETTYIRPD GRELTGSFYA
IAVQTDGNMV VSGNFNTVRD GKETTAARWH ISRLTPEGVL DPDFDYGFLG GKRADYNLNM
VNAVGKQLDG KLVMAGAFRS IGDDIEKRVL ERFSDGWAPQ EVAVQPDGKA VRWERRGTGP
EFARVTFEHS PDGVEWLPLG PAERVAGTAN WELSGNGFDL GASGTLATRF LRARGYMTNH
RGGAGPIMET IRVFYLNPAP VKQEQTIDPG DFSDKTYGDP DFDPGGSSTS GLPLTYTSSD
PGVAVAVGGE IQITGAGTAT ITVSQGGDDS FEPAEDVTVS FTVAKAPLRV VADDKVRAFL
TPNPALSASY LGFVKGEGVS VLSGSPSLST AALFESSVGE YAIAAALGTL SSQNYRFLPV
DGTLRIFRSC QEIYFPPIPE RTFGDPPFTI VASACSGLTL SFASSDREVA QVNGQTVTIT
GAGSAVITVS QPGTGSLEPA PERLQPLVVH KSGQGVSFSS LAQKVVGDPP FPLQASATSA
LPVSYASSDP LVAEVTGNMV TIVGAGTCVI TARQTGNNDF EPALPVSQPL TVASEGVAPE
LSLSTLSDGA VTSNPVLSLM GKASDLSGIA TLTVNGEEVT AEAASFSSAV VLAPGSNSVS
VSALDRAGNR TTRTLNITLA PLAPVISVVF PADNSVTDTP SCAVKGSVTP GSAVTLWLNG
SSPQLLGVEQ GSFTGSAYLS EGVNTIEISA ELSGRSSRVK RSVTLSPGGP AIAITEPAQD
LRTERQSLTI RGSTTLQQPG SVTLEVDGVP FTPLISAGGF EQQVTLSRTG VIRIRARGGG
GAGESVVAQR NLIRVEMIPG DLDGNGSVDL QDAARLLRGS LGLEPMSAEL FARGDLAPLV
NGIPQPDGVV DVGDVLVLLR RIVGLVDF
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