Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1359 |
Symbol | |
ID | 6781346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1565795 |
End bp | 1567771 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642767353 |
Product | protein of unknown function DUF224 cysteine-rich region domain protein |
Protein accession | YP_002138174 |
Protein GI | 197117747 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.548906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCTG ATCCTGTTAT CTTTACGCCG CTTCTGGCTG CGGCCTGCAC CATCTTCCTT TGGAGCTGCT ACCGCCGTTT CAGCCTGGTC ACCGTCGGCG CCGCCGAGGA CCGCTTCTCC AACACCTGGG ACCGGTTGCA GGCGATGTTC GTCTACGCCT TCTTGCAAAA GAGGGTGGTG AAGCGTCCCT TCGGCGTCAA CCACGTGTTC ATCTTCTGGT CCTTCCTGAT CCTGGCCGTG GCCAATACGG AATTCCTCAT CTGCGGCGTC TTTCCGGCGG CGAAGCTTTC CCTGCTGCTC CCGGCGGCGC TCTACCAGCC GCTACTGTTT GCGTTCGACC TGGTCTCGCT CTTCGCCCTG GGCGCCGTCG TCATCGCCCT GGTCCGCCGA GCGGTAGCCC CGCCGTACAA AGGGGCGCGC ACTGGTGAAG CGTTCGCCAT CCTTTCCATG ATCGGGACGC TGATGCTGGC CTATTTCGGC TTTCATGCCG CGGAGATCGC TCTGGGCCAC GAGCCCGCGG CTCACGTCAT GCCGCTTTCC TCGTTGCTCG CCGCCGCTCT CTCCAGCCTG AGCCCGGCAA CGCTCGGCAC CGTGGGGGTA GCTTCCTGGT GGCTCCACGC CGGGGTGCTT CTATTCTTCC TCAACTACCT CCCCTACAGC AAGCACATGC ACATCCTCGC CGCCATCCCC AACTGCTACT TCAAGGGGCT CGGTACGCCC AACACCCAGG CGCGGGAGGA GTTCGCCGAA GGAAACGTCT ACGGCGCAGG GAGCATCGAA AACTTCACCT GGAAGGACCT CTTCGATTCC TTCTCCTGCA CCGAGTGCGG CCGCTGCGAA AACGCCTGTC CCGCGGCCGC TACAGGGAAA CCGCTCAACC CGCGCCTTGT AATGCATGAC ATCAAGGTGA ACCTCCTGGC CAACGGCGCG CAGCTGCAGC GCGGCGGCGT GGCGACGGTT CCGGTGATCG GGGAAGGGGA GGGGAGCGTG GAAGTCGACG CCCTCTGGTC CTGCACCACC TGCGGCGCCT GCCTTAACGC CTGCCCGGTC TTCATCGAGC AGATGCCCAA GATCAACAAG ATGCGCCGGC ACCTGGTCCA GATGGAGGCG GATTTCCCCG AGGAGCTTTT GAACCTCTTC GAGAACATGG AACAGCGCTC CAACCCGTGG GGGATCGCCC CCGGCGACCG CGGCAAATGG GTCGGCGGCC ACGAAGTAAA ACCGTTCGAG GCGGGCCAGA CCGAATACCT CTTCTACGTC GGCTGCGCCG GCTCCTTCGA CTCCCGCGCC AAGCAGGTGA CCCTTTCCAT GGCGCGGATC CTCGACGCCG CTGGCATTTC CTGGGGAATC CTCGGCAAGG AAGAGAAGTG CTGCGGCGAC AGCGTGCGCA GGCTGGGTAA CGAATATGTC TTCGACAAGA TGGCGCGCGA GAACGTGGCC ATGTTCCAGG AGAAGAAGGT GACCAAGGTG ATCACCCAGT GTCCGCACTG CTTCAGCACC CTCAAAAACG ATTACCGGCA GTACGGCCTG GAACTGGAGG TCATCCCGCA CGCCGAGCTG ATCGAGCAGT TGCTGGGGGA AGGGAAGTTG CAGCTTGATA TGCACGAGGC CACGGGCGGG AACATCGTCT TCCACGACTC CTGCTACCTC GGGCGCCATA ACGGCGTCTA CGAGGCGCCG CGTAAGGTCA TCGCCCAGGC GACCGGTACC GCCCCCGCGG AGATGCCGAG AAACCGCGAG AATTCCTTCT GCTGCGGCGC CGGCGGCGGC CGCATGTGGC TTGAAGAGCA CCTGGGGGAG AGGATCAACC TGAACCGCGT CAACGAGGCG CTGGCCGGAT CCCCCGGCAC CATCTGCGTC ACCTGCCCGT ACTGCATGAC CATGATGGAA GACGGCCTCA AGGACCGCGC CAGCGGGCAG ACCAAGGTGA AGGACATCGC GGAAATCGTT GCAGAGGGAT TGAAAGGTAG GGCTTAG
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Protein sequence | MQPDPVIFTP LLAAACTIFL WSCYRRFSLV TVGAAEDRFS NTWDRLQAMF VYAFLQKRVV KRPFGVNHVF IFWSFLILAV ANTEFLICGV FPAAKLSLLL PAALYQPLLF AFDLVSLFAL GAVVIALVRR AVAPPYKGAR TGEAFAILSM IGTLMLAYFG FHAAEIALGH EPAAHVMPLS SLLAAALSSL SPATLGTVGV ASWWLHAGVL LFFLNYLPYS KHMHILAAIP NCYFKGLGTP NTQAREEFAE GNVYGAGSIE NFTWKDLFDS FSCTECGRCE NACPAAATGK PLNPRLVMHD IKVNLLANGA QLQRGGVATV PVIGEGEGSV EVDALWSCTT CGACLNACPV FIEQMPKINK MRRHLVQMEA DFPEELLNLF ENMEQRSNPW GIAPGDRGKW VGGHEVKPFE AGQTEYLFYV GCAGSFDSRA KQVTLSMARI LDAAGISWGI LGKEEKCCGD SVRRLGNEYV FDKMARENVA MFQEKKVTKV ITQCPHCFST LKNDYRQYGL ELEVIPHAEL IEQLLGEGKL QLDMHEATGG NIVFHDSCYL GRHNGVYEAP RKVIAQATGT APAEMPRNRE NSFCCGAGGG RMWLEEHLGE RINLNRVNEA LAGSPGTICV TCPYCMTMME DGLKDRASGQ TKVKDIAEIV AEGLKGRA
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