Gene Gbem_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1339 
Symbol 
ID6781326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1544610 
End bp1545128 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content57% 
IMG OID642767333 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_002138154 
Protein GI197117727 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00197835 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAG AAAAGAATCC CGTGGTACTC ATGGAGACCT CGATGGGCAA CGTCAAGATC 
GAACTCTTCA AGGACAAGGC CCCGATTTCC GTTCGCAACT TCCTCTCCTA TGTCAAGGAT
GCCTACTACG ACGGCACCAT CTTCCATCGC GTCATCAAGA ACTTCATGGT GCAGGGTGGC
GGGTTGGACA CCGACATGCA GCCCAAGAAG ACCAAGTTCG CCATCAAGAA CGAGGCCACC
AACGGGCTTA AAAACCTGCG CGGCACCCTG GCCATGGCCA GGACTTCGGT TGTGGACAGC
GCGACCTCGC AGTTCTTCAT CAACGTCGTG GACAACGCCT TCCTCGACCA TTCAGGCAAG
ACCCCGGACC GTTTCGGCTA CGCGGTCTTT GCGCAGGTCA TCGAAGGGAT GGACGTGGTC
GACGCCATTC GCGAGGTGAA GACCGGCAAC AAGGCGGGGC ACCAGGATGT TCCTGTCGAG
CCGGTGTTCA TCAACTCCAT CAGGCTCGTG GAGGAGTAA
 
Protein sequence
MTEEKNPVVL METSMGNVKI ELFKDKAPIS VRNFLSYVKD AYYDGTIFHR VIKNFMVQGG 
GLDTDMQPKK TKFAIKNEAT NGLKNLRGTL AMARTSVVDS ATSQFFINVV DNAFLDHSGK
TPDRFGYAVF AQVIEGMDVV DAIREVKTGN KAGHQDVPVE PVFINSIRLV EE