Gene Gbem_1325 details

Gene Information

• Locus tag: Gbem_1325
• ID: 6781312
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1529510
• End bp: 1529992
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642767319
• Product: histidine triad (HIT) protein
• Protein accession: YP_002138140
• Protein GI: 197117713
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0365255
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAATC TTTGGGCACC ATGGCGGGTA GAATATCTGA CTCAGCCGCC GGCGACGGAA 
TGCATCTTCT GTGCGCAAGG TAACGACAGG GAGCTGCTGA TTTTGAGGCG CACCCGGCTT 
TCGCGGGTGA TGCTGAACCG CTACCCCTAT TCCAACGGAC ATCTGCTGAT CTCGCTTAAC 
CGCCACAGCG CCGACTTGGG CGAACTGACA GCGGACGAAC TGCTGGAGCT GATGCGCGAG 
GTGGCTCTTT GCCGGGACAT ACTGGCCCGC TCCAGCGGCG CTCAAGGTTT CAACATCGGC 
ATAAACCTCG GCAAGGCCGC CGGCGCAGGC GTCGAGGACC ACCTGCACCT GCACGTGGTG 
CCGCGCTGGT ACGGGGACAG CAACTTCATG ACTGTGGTAG CGGACGTCAG GGTGATCCCG 
GAGGCGCTTT TGGCGACTTA CGACCGGCTG CTACCGTTTT TCCAGGCGGC AGTGGAGGGG 
TGA 

 

Protein sequence

MDNLWAPWRV EYLTQPPATE CIFCAQGNDR ELLILRRTRL SRVMLNRYPY SNGHLLISLN 
RHSADLGELT ADELLELMRE VALCRDILAR SSGAQGFNIG INLGKAAGAG VEDHLHLHVV 
PRWYGDSNFM TVVADVRVIP EALLATYDRL LPFFQAAVEG