Gene Gbem_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1317 
Symbol 
ID6781304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp1519125 
End bp1519493 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content56% 
IMG OID642767311 
Product6-pyruvoyl tetrahydropterin synthase and hypothetical protein 
Protein accessionYP_002138132 
Protein GI197117705 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0808696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGTC TCACCATTCA CACTGCCTTC GCTGCAGCCC ACAACTTGAT CAACTACCAG 
GGGGACTGCG AGAACCTGCA TGGCCACAAC TGGAAGGTCG AGGTATCGGT AACGACCAAT 
GAACTGGACA AGGCGGGGCT CGGCATCGAC TTCAAGATCC TCAAGCGGGA GACCAACACC 
CTCTTGAAGA CCCTGGACCA CAAGTACCTG AACGAGCTCC CCCCTTTCTT GGAGGTCTCC 
CCCTCTTCCG AGAACATCGC GCGCTACCTT TATCATGAGC TGACCAAGAT CCTTGGCAGC 
GACAAGGTGA AGGTGGAGAT GGTCACCGTG TGGGAGTCGG ATTTCGCCGC CGCGAGCTAC 
TATGAGTAA
 
Protein sequence
MFRLTIHTAF AAAHNLINYQ GDCENLHGHN WKVEVSVTTN ELDKAGLGID FKILKRETNT 
LLKTLDHKYL NELPPFLEVS PSSENIARYL YHELTKILGS DKVKVEMVTV WESDFAAASY 
YE