Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1308 |
Symbol | |
ID | 6781295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1510921 |
End bp | 1513011 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642767302 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_002138123 |
Protein GI | 197117696 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00697732 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTACACA CCGTACAGGC AGAATGCTGT GGCAAGACAA TCACCATCGA AACGGGAAAG ATCGCGAAGC AGGCCAGCGG CGCAGTCATG ATCAAAAGCG GCGACACCAT GGTGCTCGTC ACCGCCGTCG CCATGAAGAG CGCCAAGGAA GGGCAGGGGT TCTTCCCGCT CACCGTCAAC TACCAGGAGA AGGCGTACGC GGGCGGCCGC ATCCCCGGGT CCTTCTTCAA GCGCGAGGGG CGTCCCTCCG ACAACGAGAC CCTGACCTGC CGTCTCATCG ACCGCCCGAT CCGTCCGCTG TTCCCGGAGA ACTTCCTTAA CGACACCCAG ATCATGGCGA CCGTGGTTTC GGCCGACAAG GACAACGACC CCGGCATCCT CTCCATGATC GGCGCCTCCG CGGCCCTGAT GGTTTCCGAC GTCCCCTTCG CAGGCCCCAT CGCCGGCGTC AAGGTCGGCC GCGTCGACGG CCAGTTCATC GCCAACCCGA CTGCGGAGCA GGAAGAAAAG AGCGACCTCG AGATCGTGAT CGCCGCCAGC CAGGACGCAA TCCTGATGGT GGAAGGTTCC GCCTGCGAGG TTTCCGAGGA CGACCTGCTG GAAGCCATTT TCTTCGGCCA CAAAGCGGTG CAGCCGGTCC TCGCCGCCCA GCTCGAGCTC GCCAAGAAAG TCGGCACCTC GAAGCGCGAA ATCCCGGCGC CGGTGGTGAA CGAGGCGCTG AAGGCGCGCG TATCCGCTCT CGCCAAAGAG GGGATGAAGC AGGCGGTCCG CATCAAGACC AAGGTGGAGC GCCACCTGGC CATCGACGCC ATCGCGGACG AGACCGTCGC GGCACTTTCG GCCGAGTTCG AAGGCTCCGA GAAAGAAATC AAAGGTTTCA TCGAAGACCT CGAGTACGAC CTCGTGCGTG AGCACATCAT CAAGGACGGC CAGAGGATCG ACGGGCGCGA TACCAAGACC ATCCGCGCCA TCTCCACCGA AGTAAGCCTG CTCCCCCGCG CCCACGGCTC CGCCCTGTTC ACCCGCGGCG AGACCCAGTC CATCGTGGCG GCGACGCTCG GCACCTCGGT CGACGAGCAG CGCATCGACT CGCTCTACGG CGACTCCAGG AAGAAGTTCA TGCTGCACTA CAACTTCCCT CCGTACTCCG TCGGCGAGAC CAGCTTCCGC CTTGCCCCGG GGCGCCGCGA GATCGGCCAC GGCATGCTCG CCGAGCGCGC CCTGCAGCAG GTGCTCCCGA AGCATGACGA CTTCCCCTAC ACCATCAGGA TCGTTTCCGA CATCACCGAG AGCAACGGCT CCTCTTCGAT GGCGACCGTC TGCGGCGGCT CGCTGTCCAT GATGGACGCA GGCATCCCGA TCAAGGCGCC GGTTGCCGGC ATCGCCATGG GCCTCATCAA GGAAGGCGAC GATTTCGCCA TCCTCTCCGA CATCCTCGGC GACGAAGACC ACCTGGGCGA CATGGACTTC AAAGTGGCCG GTACCGCCGA AGGCGTCACC GCGCTGCAGA TGGACATCAA GATCGGCGGC GTCACCCGCG AGATCATGAG CGCGGCGCTG GCTCAGGCCA AGGCAGGCAG GATCCACATC CTGGGCGAGA TGGCCAAGAC CATCGGGGCA TCGCGCGGCG ACCTCTCCGC CTTCGCGCCT CGCATCACCA CCATCTGGGT CAAAGTCGAC AAGATCCGCG ACGTCATCGG GAGCGGCGGC AAGAACATCA GGAGCGTCAC CGAGGCGACC GGCGTCTCCA TCGACATCGA CGACACCGGC AAGATCAACA TCGCTTCCAC CAACAAGGAA GCCTGCGACC TCGCCATCAA GATGATCAGG AACCTCACCG CCGAGGCCGA GGAAGGGAAG CTCTACATGG GCACCGTCAA AAAGATCATG GAGTTCGGCG CCTTCGTGGA GATCTTCCCG GGAACCGACG GCCTGGTCCA CGTCTCCGAG CTCGACACCG AGCGCGTCAA GAACGTGAGC GACATCCTCA AAGAGGGCGA CAAGGTCCTG GTCAAGTGCA TCGGCATCGA CAAGCAGGGC AAGATCAAGC TGTCCCGTAA AGAGGCTCTG GGACTGACTT TCACCGAATA A
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Protein sequence | MVHTVQAECC GKTITIETGK IAKQASGAVM IKSGDTMVLV TAVAMKSAKE GQGFFPLTVN YQEKAYAGGR IPGSFFKREG RPSDNETLTC RLIDRPIRPL FPENFLNDTQ IMATVVSADK DNDPGILSMI GASAALMVSD VPFAGPIAGV KVGRVDGQFI ANPTAEQEEK SDLEIVIAAS QDAILMVEGS ACEVSEDDLL EAIFFGHKAV QPVLAAQLEL AKKVGTSKRE IPAPVVNEAL KARVSALAKE GMKQAVRIKT KVERHLAIDA IADETVAALS AEFEGSEKEI KGFIEDLEYD LVREHIIKDG QRIDGRDTKT IRAISTEVSL LPRAHGSALF TRGETQSIVA ATLGTSVDEQ RIDSLYGDSR KKFMLHYNFP PYSVGETSFR LAPGRREIGH GMLAERALQQ VLPKHDDFPY TIRIVSDITE SNGSSSMATV CGGSLSMMDA GIPIKAPVAG IAMGLIKEGD DFAILSDILG DEDHLGDMDF KVAGTAEGVT ALQMDIKIGG VTREIMSAAL AQAKAGRIHI LGEMAKTIGA SRGDLSAFAP RITTIWVKVD KIRDVIGSGG KNIRSVTEAT GVSIDIDDTG KINIASTNKE ACDLAIKMIR NLTAEAEEGK LYMGTVKKIM EFGAFVEIFP GTDGLVHVSE LDTERVKNVS DILKEGDKVL VKCIGIDKQG KIKLSRKEAL GLTFTE
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