Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1302 |
Symbol | infB |
ID | 6781289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1503696 |
End bp | 1506656 |
Gene Length | 2961 bp |
Protein Length | 986 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642767296 |
Product | translation initiation factor IF-2 |
Protein accession | YP_002138117 |
Protein GI | 197117690 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.454709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA CCCGCGTATA TGAGCTGGCG CAGCAGATGG GGATAGACAA TAAAGAGCTT ATGGCAAGGC TGGCCGACGC TGGTGTGTCG GTAAAGAACC ATATGGCGGT CCTTGAGGAT TCGGATATCA AGGCGCTGTC CGCCCCTGCG CAGACACCCC ACAAAGAAGT CTCCCAGGAG GAAGTTCGGG TCAAGCCGAC CCTGATCCGC CGCCGGGCCA AGGCCGTCGA GCCTGAGGCC GCTTCCGCCG AAGCCGCATC CGCTCCCGCG GCTCAGGAAG AGGCCCCGCA AAAGGCCGAG CCCGAGAAGG TCGAGGCCGA GAAGGCTGAG GCCCCCAAGC CGCGCCAGGC AGCGGAACCG GTCCGCGCCC GCATCATAGA GGCTGCGCCC GTGCCTAAGC CCGCAGCGGC ACCTGCCGAG GCAGCGAAGC CCGAGAAGGC AAAACCGGCC GAGCCGGCAC CCGTTGCCGC CGCTCCCAAG GCTGCGGAAG CTCCGGCGGC ACCCGCCGCG GAAGCCGCCC CCGCGGCCCC GGCACCGGCA GAAGCCCCGG TAGCGAAGCC GGCAGCGAAG CTGGAAGCGT CCGCCCCGGC AGCACCCGCG GCGCCGGCAG CGGCCGCCCC CGTCGAGGCC CAGGCCCCCG CCAAGGCCGA AGAGCAGGAG CCCGAAAAGG CGACCCCCAC CAGGGCAAGG ATCCTGGGCC GGGTCGAGAT CCCGATTCCC GCGCAGCGCC CCGCCGAGCG CCGCGAATAC CAGCGCACCG CCCCGGGCGA ACGCCCCGCG CCGCGTCCCG GCATGCCGCG CGGCGTCGAG CGCCCCGGCA CCGAGCGCCC CGCGCCCCGT CCGGGTGGGC CGCGTCCCGC AGGCGCCCCT GGCCGTCCCG GCGAACGTCC GACCACCGGC CGCCCCGGCG GACCCACCGG CGGGCGTCCT GATCGTCCCG CACCGCTTGC TCCGATAGAT GCGCCGCCGC TTCTGGGCGA CGACCGCCGC AAAGGGAGAA AGCCGGCCCC TGCCGGCGGC ACCGACTACG CCAAAAACGG CAAGAAGGGC GCACCCGCCG CAGCAGGGAA GGGGAAGAAG GATAGCTTCA AGGACATCCT CGACAAGCGC GAGCGCGTCT TCGAGCCGGG TCCCCGTTCC AAGGGCAGAA AAGGTAAATA CGAGAAGGTC CAGATCGGCA AGAAGACCGA GATCACGGTT CCGAAGGCTA TCAAGAGGAT CATCAAGATC TCCGAGTCCA TCACCGTGGG CGAACTCGCC AAGAGGATGG GGATCAAGGC CACCGACCTG ATCCGCGCGC TGATGAAGCT GGGGGTCATG GCCACCATCA ACCACCCGCT CGACTTCGAC ACCGCTACTC TTCTCGCCAC CGACTTCGGC TACGAGATCG AGAACGTGGC GCTCGACGTG GACGAGATCC TGGAGGCGGA GCCGGATACG CCGGAGTCCC TGCTGAAGCG TCCGCCGGTC GTCACCATCA TGGGTCACGT CGACCACGGC AAGACCTCGC TTCTGGATGC CATCCGCGAA GCTAACGTCA TAGCCGGCGA GGCCGGCGGC ATCACCCAGC ATATCGGCGC CTACGACGTG GAGCTGAACG GCAAGAAGAT CACCTTCCTA GATACCCCGG GCCACGAGGC GTTCACCGCT ATGCGCGCCA GGGGGGCCAA GGTCACCGAC ATCGTCATCC TGGTGGTGGC GGCGGACGAC GGCGTCATGC CGCAGACCCG CGAGGCGGTG AACCACTCTA AGGCTGCCGG CGTTCCCATC ATCGTGGCGA TCAACAAGAT CGACAAGCCC GATGCGAGCC CCGGCAAGGT GAAGCAGGAA CTGATGGAGT TCGGCCTGGT TTCCGAGGAG TGGGGTGGCG AGACCATCTT CGTCGAGGTC TCCGCCAAGA AGCGGATCAA CCTGGAGTCG CTTTTGGAGA TGGTCCTTTT GCAGGCGGAC GTACTCGAGC TCAGGGCCAA CCCGGACAAG CCCGCCCGCG GCACCATCGT AGAGGCGAAG TTGGACAAGG GGCGCGGCCC GGTCGCGACC GTCCTGGTCC AGGAAGGAAC ACTCAAAAGC GGCGACTATT TCGTGGCGGG CGTCCACTAC GGCCGCGTCC GCGCCATGCA GAACGACCGC GGGGAGAAGG TGCTTGCCGC AGGCCCGGCC ATGCCGGTCG AGGTGATCGG CTTCAACGGG GTTCCCGACG CGGGCGACAT CTTCGTGGCC ATGGGCGACG AGAAGCAGGC CAAGGAGATC GCAAACCACC GCCAGATGAA GCTGCGCGAG TCGGAACTCG CCAAGCACAG CAAGCTCTCC CTGGAGCAAC TCTACGAGAA GATCCAGAAG GGCGAGGTGA AGGACCTGAA CGCGATCGTC AAGGGGGACG TGCAGGGTTC GGTCGAGGCA GTGGCCGAGT CGCTCAGAAA GCTCTCCACC GACGCCATCC GCCTCAACGT GCTGCACGCC TCGGTCGGCG CCATCACCGA GACCGATGTC AACCTGGCCA GCGCCTCCAA CGCCATCATC CTCGGCTTCA ACGTCCGTCC CGAGGTCAAG GCGGCGGCGC TCGCCGAGAA GGAAGGGGTC GACGTCAGGC TCTACAACAT CATCTACGAC GCGGTGGACG ACATCAAGAA GGCGATGGAA GGTCTCCTGG AGCCGACCTT CAAGGAGAAG TACCTGGGTC GCGCCGAGAT CCGCGAGGTA TTCTCGGTAC CAAAGGCCGG CATGGTCGCA GGTTCCTACG TCACCGACGG CAAGATCGTC AGAAACGCCC AGGTCCGCCT TTTGCGCGAC AACATGGTGG TCTACGAAGG GAAGCTGGGA AGCCTGCGCC GCTTCAAGGA CGACGTGAAG GAAGTGGCCA CCGGCTACGA GTGCGGCATG TCGCTTGAGA ACTACAACGA CCTCAAAATC GGCGACATCT TCGAGTGCTT CGAGATGGAG AAGGTAGCCG GCAAACTGTA G
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Protein sequence | MSKTRVYELA QQMGIDNKEL MARLADAGVS VKNHMAVLED SDIKALSAPA QTPHKEVSQE EVRVKPTLIR RRAKAVEPEA ASAEAASAPA AQEEAPQKAE PEKVEAEKAE APKPRQAAEP VRARIIEAAP VPKPAAAPAE AAKPEKAKPA EPAPVAAAPK AAEAPAAPAA EAAPAAPAPA EAPVAKPAAK LEASAPAAPA APAAAAPVEA QAPAKAEEQE PEKATPTRAR ILGRVEIPIP AQRPAERREY QRTAPGERPA PRPGMPRGVE RPGTERPAPR PGGPRPAGAP GRPGERPTTG RPGGPTGGRP DRPAPLAPID APPLLGDDRR KGRKPAPAGG TDYAKNGKKG APAAAGKGKK DSFKDILDKR ERVFEPGPRS KGRKGKYEKV QIGKKTEITV PKAIKRIIKI SESITVGELA KRMGIKATDL IRALMKLGVM ATINHPLDFD TATLLATDFG YEIENVALDV DEILEAEPDT PESLLKRPPV VTIMGHVDHG KTSLLDAIRE ANVIAGEAGG ITQHIGAYDV ELNGKKITFL DTPGHEAFTA MRARGAKVTD IVILVVAADD GVMPQTREAV NHSKAAGVPI IVAINKIDKP DASPGKVKQE LMEFGLVSEE WGGETIFVEV SAKKRINLES LLEMVLLQAD VLELRANPDK PARGTIVEAK LDKGRGPVAT VLVQEGTLKS GDYFVAGVHY GRVRAMQNDR GEKVLAAGPA MPVEVIGFNG VPDAGDIFVA MGDEKQAKEI ANHRQMKLRE SELAKHSKLS LEQLYEKIQK GEVKDLNAIV KGDVQGSVEA VAESLRKLST DAIRLNVLHA SVGAITETDV NLASASNAII LGFNVRPEVK AAALAEKEGV DVRLYNIIYD AVDDIKKAME GLLEPTFKEK YLGRAEIREV FSVPKAGMVA GSYVTDGKIV RNAQVRLLRD NMVVYEGKLG SLRRFKDDVK EVATGYECGM SLENYNDLKI GDIFECFEME KVAGKL
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