Gene Gbem_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1302 
SymbolinfB 
ID6781289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1503696 
End bp1506656 
Gene Length2961 bp 
Protein Length986 aa 
Translation table11 
GC content66% 
IMG OID642767296 
Producttranslation initiation factor IF-2 
Protein accessionYP_002138117 
Protein GI197117690 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.454709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA CCCGCGTATA TGAGCTGGCG CAGCAGATGG GGATAGACAA TAAAGAGCTT 
ATGGCAAGGC TGGCCGACGC TGGTGTGTCG GTAAAGAACC ATATGGCGGT CCTTGAGGAT
TCGGATATCA AGGCGCTGTC CGCCCCTGCG CAGACACCCC ACAAAGAAGT CTCCCAGGAG
GAAGTTCGGG TCAAGCCGAC CCTGATCCGC CGCCGGGCCA AGGCCGTCGA GCCTGAGGCC
GCTTCCGCCG AAGCCGCATC CGCTCCCGCG GCTCAGGAAG AGGCCCCGCA AAAGGCCGAG
CCCGAGAAGG TCGAGGCCGA GAAGGCTGAG GCCCCCAAGC CGCGCCAGGC AGCGGAACCG
GTCCGCGCCC GCATCATAGA GGCTGCGCCC GTGCCTAAGC CCGCAGCGGC ACCTGCCGAG
GCAGCGAAGC CCGAGAAGGC AAAACCGGCC GAGCCGGCAC CCGTTGCCGC CGCTCCCAAG
GCTGCGGAAG CTCCGGCGGC ACCCGCCGCG GAAGCCGCCC CCGCGGCCCC GGCACCGGCA
GAAGCCCCGG TAGCGAAGCC GGCAGCGAAG CTGGAAGCGT CCGCCCCGGC AGCACCCGCG
GCGCCGGCAG CGGCCGCCCC CGTCGAGGCC CAGGCCCCCG CCAAGGCCGA AGAGCAGGAG
CCCGAAAAGG CGACCCCCAC CAGGGCAAGG ATCCTGGGCC GGGTCGAGAT CCCGATTCCC
GCGCAGCGCC CCGCCGAGCG CCGCGAATAC CAGCGCACCG CCCCGGGCGA ACGCCCCGCG
CCGCGTCCCG GCATGCCGCG CGGCGTCGAG CGCCCCGGCA CCGAGCGCCC CGCGCCCCGT
CCGGGTGGGC CGCGTCCCGC AGGCGCCCCT GGCCGTCCCG GCGAACGTCC GACCACCGGC
CGCCCCGGCG GACCCACCGG CGGGCGTCCT GATCGTCCCG CACCGCTTGC TCCGATAGAT
GCGCCGCCGC TTCTGGGCGA CGACCGCCGC AAAGGGAGAA AGCCGGCCCC TGCCGGCGGC
ACCGACTACG CCAAAAACGG CAAGAAGGGC GCACCCGCCG CAGCAGGGAA GGGGAAGAAG
GATAGCTTCA AGGACATCCT CGACAAGCGC GAGCGCGTCT TCGAGCCGGG TCCCCGTTCC
AAGGGCAGAA AAGGTAAATA CGAGAAGGTC CAGATCGGCA AGAAGACCGA GATCACGGTT
CCGAAGGCTA TCAAGAGGAT CATCAAGATC TCCGAGTCCA TCACCGTGGG CGAACTCGCC
AAGAGGATGG GGATCAAGGC CACCGACCTG ATCCGCGCGC TGATGAAGCT GGGGGTCATG
GCCACCATCA ACCACCCGCT CGACTTCGAC ACCGCTACTC TTCTCGCCAC CGACTTCGGC
TACGAGATCG AGAACGTGGC GCTCGACGTG GACGAGATCC TGGAGGCGGA GCCGGATACG
CCGGAGTCCC TGCTGAAGCG TCCGCCGGTC GTCACCATCA TGGGTCACGT CGACCACGGC
AAGACCTCGC TTCTGGATGC CATCCGCGAA GCTAACGTCA TAGCCGGCGA GGCCGGCGGC
ATCACCCAGC ATATCGGCGC CTACGACGTG GAGCTGAACG GCAAGAAGAT CACCTTCCTA
GATACCCCGG GCCACGAGGC GTTCACCGCT ATGCGCGCCA GGGGGGCCAA GGTCACCGAC
ATCGTCATCC TGGTGGTGGC GGCGGACGAC GGCGTCATGC CGCAGACCCG CGAGGCGGTG
AACCACTCTA AGGCTGCCGG CGTTCCCATC ATCGTGGCGA TCAACAAGAT CGACAAGCCC
GATGCGAGCC CCGGCAAGGT GAAGCAGGAA CTGATGGAGT TCGGCCTGGT TTCCGAGGAG
TGGGGTGGCG AGACCATCTT CGTCGAGGTC TCCGCCAAGA AGCGGATCAA CCTGGAGTCG
CTTTTGGAGA TGGTCCTTTT GCAGGCGGAC GTACTCGAGC TCAGGGCCAA CCCGGACAAG
CCCGCCCGCG GCACCATCGT AGAGGCGAAG TTGGACAAGG GGCGCGGCCC GGTCGCGACC
GTCCTGGTCC AGGAAGGAAC ACTCAAAAGC GGCGACTATT TCGTGGCGGG CGTCCACTAC
GGCCGCGTCC GCGCCATGCA GAACGACCGC GGGGAGAAGG TGCTTGCCGC AGGCCCGGCC
ATGCCGGTCG AGGTGATCGG CTTCAACGGG GTTCCCGACG CGGGCGACAT CTTCGTGGCC
ATGGGCGACG AGAAGCAGGC CAAGGAGATC GCAAACCACC GCCAGATGAA GCTGCGCGAG
TCGGAACTCG CCAAGCACAG CAAGCTCTCC CTGGAGCAAC TCTACGAGAA GATCCAGAAG
GGCGAGGTGA AGGACCTGAA CGCGATCGTC AAGGGGGACG TGCAGGGTTC GGTCGAGGCA
GTGGCCGAGT CGCTCAGAAA GCTCTCCACC GACGCCATCC GCCTCAACGT GCTGCACGCC
TCGGTCGGCG CCATCACCGA GACCGATGTC AACCTGGCCA GCGCCTCCAA CGCCATCATC
CTCGGCTTCA ACGTCCGTCC CGAGGTCAAG GCGGCGGCGC TCGCCGAGAA GGAAGGGGTC
GACGTCAGGC TCTACAACAT CATCTACGAC GCGGTGGACG ACATCAAGAA GGCGATGGAA
GGTCTCCTGG AGCCGACCTT CAAGGAGAAG TACCTGGGTC GCGCCGAGAT CCGCGAGGTA
TTCTCGGTAC CAAAGGCCGG CATGGTCGCA GGTTCCTACG TCACCGACGG CAAGATCGTC
AGAAACGCCC AGGTCCGCCT TTTGCGCGAC AACATGGTGG TCTACGAAGG GAAGCTGGGA
AGCCTGCGCC GCTTCAAGGA CGACGTGAAG GAAGTGGCCA CCGGCTACGA GTGCGGCATG
TCGCTTGAGA ACTACAACGA CCTCAAAATC GGCGACATCT TCGAGTGCTT CGAGATGGAG
AAGGTAGCCG GCAAACTGTA G
 
Protein sequence
MSKTRVYELA QQMGIDNKEL MARLADAGVS VKNHMAVLED SDIKALSAPA QTPHKEVSQE 
EVRVKPTLIR RRAKAVEPEA ASAEAASAPA AQEEAPQKAE PEKVEAEKAE APKPRQAAEP
VRARIIEAAP VPKPAAAPAE AAKPEKAKPA EPAPVAAAPK AAEAPAAPAA EAAPAAPAPA
EAPVAKPAAK LEASAPAAPA APAAAAPVEA QAPAKAEEQE PEKATPTRAR ILGRVEIPIP
AQRPAERREY QRTAPGERPA PRPGMPRGVE RPGTERPAPR PGGPRPAGAP GRPGERPTTG
RPGGPTGGRP DRPAPLAPID APPLLGDDRR KGRKPAPAGG TDYAKNGKKG APAAAGKGKK
DSFKDILDKR ERVFEPGPRS KGRKGKYEKV QIGKKTEITV PKAIKRIIKI SESITVGELA
KRMGIKATDL IRALMKLGVM ATINHPLDFD TATLLATDFG YEIENVALDV DEILEAEPDT
PESLLKRPPV VTIMGHVDHG KTSLLDAIRE ANVIAGEAGG ITQHIGAYDV ELNGKKITFL
DTPGHEAFTA MRARGAKVTD IVILVVAADD GVMPQTREAV NHSKAAGVPI IVAINKIDKP
DASPGKVKQE LMEFGLVSEE WGGETIFVEV SAKKRINLES LLEMVLLQAD VLELRANPDK
PARGTIVEAK LDKGRGPVAT VLVQEGTLKS GDYFVAGVHY GRVRAMQNDR GEKVLAAGPA
MPVEVIGFNG VPDAGDIFVA MGDEKQAKEI ANHRQMKLRE SELAKHSKLS LEQLYEKIQK
GEVKDLNAIV KGDVQGSVEA VAESLRKLST DAIRLNVLHA SVGAITETDV NLASASNAII
LGFNVRPEVK AAALAEKEGV DVRLYNIIYD AVDDIKKAME GLLEPTFKEK YLGRAEIREV
FSVPKAGMVA GSYVTDGKIV RNAQVRLLRD NMVVYEGKLG SLRRFKDDVK EVATGYECGM
SLENYNDLKI GDIFECFEME KVAGKL