Gene Gbem_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1298 
Symbol 
ID6781285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1499588 
End bp1500964 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content63% 
IMG OID642767292 
Productthreonine synthase 
Protein accessionYP_002138113 
Protein GI197117686 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000609388 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA TAAGCACCAG GGGAAAGATA GCGCCGGTCG GTTTCAAGGA CGCGGTCATG 
ATGGGACTTG CCACCGACGG CGGGCTGATT CTTCCGGAAT CAATCCCGCA GCTCGACCGC
GGCACCTTGG CCGCCTGGTC CAAGCTCCCC TACCGCGAGC TTGCCTTCAA CGTCATCTCC
CTTTTCGCCA CCGACATACC GGCTTTCGAC CTGAAGGCGC TCATCGACCG TTCCTACGGC
AGCTTCGAGC ACGAGGAGAC CACGCCGCTG GTGCAAAAGG ACGGCGTCTA CATATTGGAG
CTCTTCCACG GCCCCACCCT CGCCTTCAAG GACGTGGCGC TGCAGCTTCT TGGGAACCTC
TTCGAATACC TTTTGAAGGA GCGCGGGGAG AAGATGAACA TCCTCGGCGC CACCTCGGGC
GACACCGGGA GCGCGGCCAT TGCCGGGGTG CGCGGCAAGG AGAACATCAA CATCTTCATC
CTGCATCCGC ACCTGAAGAC CTCGCCGATC CAGGCGCTGC AGATGACCAG CGTACTCGAC
GAGAACGTGC ACAACGTCGC GGTGGAGGGG ACCTTCGACG ACTGCCAGAA CATCGTGAAG
GCCCTCTTCA ACGACCTGCA GTTCAAGAAG GAGTACGCGC TCGGCGCGGT GAACTCGATC
AACTGGGCGC GCGTTTTGGC CCAGGTGGTC TACTACTTCT ACGCCTGGGG TAGGCTCCCG
GAGCAAAAAG AGGTGATCTT CTCCGTCCCC ACCGGCAACT TCGGCGACAT CTTCGCCGGC
TACCTCGCGA AAAGGATGGG GCTCCCGGTG GAGAAGCTGC TTTTGGCCAC CAACGAGAAC
AACATCCTCG CCCGCTTCGT GCAAACCGGC GACTATTCGC TCGGGAAGGT GGTGCAGACC
GTCTCCCCCT CCATGGACAT CCAGCTCGCC TCCAACCTTG AGCGCTACCT CTACTACCTC
TGGGACGAGA ACCCGGAGAA GGTCTGCAGC GCCTTCGCCG AATTGCAGTC GACCGGCAGG
ATCGTGTTCA CCAAGGAGCA GGTGCTAAGG GTGCAGGCGG AGTTCATGAG CTGCACGGTG
GACGAGCAGA AGACCCTGGA TACCATCGCC TCCTTCAACC GCGAAACCGG CTACCTCCTC
GACCCACACA CCGCGGTCGG CGTGCGCGGC GCCCTGGAAT GCGCGCCGGG TCACCCGAGG
GTGGTCTGCC TCGCCACGGC ACACCCGGCG AAATTCGGGG ATGCCGTCGA GCGCGCCGTA
GGCTCACCTC CCCCGCTTCC CCCGGCACTC GCGGCCCTGG TGGGTAAAGA GACCCGCTGC
GAGCTGATGG CGCCCGACCG GGAGAAGATC AAGGCGTTCG TCAAGGCCAA GGCGTAA
 
Protein sequence
MKYISTRGKI APVGFKDAVM MGLATDGGLI LPESIPQLDR GTLAAWSKLP YRELAFNVIS 
LFATDIPAFD LKALIDRSYG SFEHEETTPL VQKDGVYILE LFHGPTLAFK DVALQLLGNL
FEYLLKERGE KMNILGATSG DTGSAAIAGV RGKENINIFI LHPHLKTSPI QALQMTSVLD
ENVHNVAVEG TFDDCQNIVK ALFNDLQFKK EYALGAVNSI NWARVLAQVV YYFYAWGRLP
EQKEVIFSVP TGNFGDIFAG YLAKRMGLPV EKLLLATNEN NILARFVQTG DYSLGKVVQT
VSPSMDIQLA SNLERYLYYL WDENPEKVCS AFAELQSTGR IVFTKEQVLR VQAEFMSCTV
DEQKTLDTIA SFNRETGYLL DPHTAVGVRG ALECAPGHPR VVCLATAHPA KFGDAVERAV
GSPPPLPPAL AALVGKETRC ELMAPDREKI KAFVKAKA