| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1297 |
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| Symbol | |
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| ID | 6781284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1498839 |
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| End bp | 1499531 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642767291 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_002138112 |
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| Protein GI | 197117685 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000944364 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTCC CTCTGAAAAT CGACTGGACC CTCATCGACA CCGTACTGCT GGACATGGAC
GGCACGCTCT TGGACCGGCA CTTCGACGAC CACTTCTGGG TGGAGCACGT CCCCAAGCGC
TACGCCGAGA AACACGGAGG CACCGTTCAG GCGGCCAAAG AGAAGCTGTA CCGCATGTTC
CGCTCGCAGG AAAACACCCT CAACTGGACC GATCTCGACT ATTGGTCCGA GCAGCTGGGG
CTCGACATCC CGGTGCTCAA GGAAGAGCTG AACCACCTGA TCGCGGTGCA CCCTTTCGTC
ACCGAGTTCC TCCTCTTTCT GCGCCAGCAC GGCAAGAAGA CGTACCTGGT CACCAACGCC
CACGGAAAGA CGCTCAACTT GAAGCTGCGC AGAACGAGGA TTGGGAGCTA CTTCGACGGG
ATAGTCTCGG CCCACGACCT GGGACTTCCC AAGGAGGATC CGGCCTTCTG GGGGAAACTG
CAGCAGGTTA TACCGTACAT ACCTCAGCGA AGCATGCTCG GGGAGGACAG CGAGACCAAC
CTGGAGACGG CGCGGCTTTT CGGCATCGGC TACCTGATCC ACGTCGGGCG CTTCAGCTCC
ACCTCCGTCC CTTCGCTTTC CGAGCGCTTC CACACCATCC ACTACTTCAG CGAACTGATC
CCTCGCGACG GCGGCATGAC GGTCAATATC TGA
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| Protein sequence | MPLPLKIDWT LIDTVLLDMD GTLLDRHFDD HFWVEHVPKR YAEKHGGTVQ AAKEKLYRMF
RSQENTLNWT DLDYWSEQLG LDIPVLKEEL NHLIAVHPFV TEFLLFLRQH GKKTYLVTNA
HGKTLNLKLR RTRIGSYFDG IVSAHDLGLP KEDPAFWGKL QQVIPYIPQR SMLGEDSETN
LETARLFGIG YLIHVGRFSS TSVPSLSERF HTIHYFSELI PRDGGMTVNI
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