| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1295 |
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| Symbol | |
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| ID | 6781282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 1495993 |
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| End bp | 1497759 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642767289 |
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| Product | oligoendopeptidase, pepF/M3 family |
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| Protein accession | YP_002138110 |
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| Protein GI | 197117683 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0778267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGCG ACCTCAATTG GGATACGACC CCGCTCTACC CCGCCCCTTC CGCACCGGAA
CTTGCCCGCG CCTTCGAAGA AGGGACCGGC CAGGTGGCCG CCTTTCGCGA GCGCTACCGC
GGAAAGGTGG CGGAGCTCGA CGCAGAGGGG CTCCTGGAAG CGCTGAAGCA ATACGAGTCC
CTGCAGGAGA AGCTGGCGAC GCCTCAGCTC TACGCCCACC TTCTCTTCGC CGCGGACAGC
GAGAGCGACG AGCACAAGCG GCTGTCGCAG AAAGCCGAAG AGTTCGGCAA CGCCATGGGG
AGGGAGCTGA TCTTCTTCGA CCTGGAACTG ATCCAGATGG AGGAGGAGCC CTTCGCGAAG
CTTGCGGACG ACCTGCTGCT GGAAAACTAC CGCCACTACC TGCAGGTTTT GCGCAAGTTC
AAGAAGCACA CCCTGACCGA GCGGGAAGAA AGCCTTCTAG CGCAAAAGAG CCTGACCGGG
GTGCAGGCGT TTTGCCGCCT CTTCGACGAG GTCTCCGCCT CGCTGCGCTA CACCCTGGAG
ATGGAGGGAG AGACGCGGGA GATGACCGGC GAGGAGCTCC TGGCGCTCTT GCACCACCCG
GACACAGGGC TTAGGGAAAG GGCCTTCGGC ACCTTCCTCA AACGCCACGA GGAAAACGGC
ATCATGTTTT CCGCCGTCTT CAACAACGTC GCCTTGGACC ACTCCCAGGA GCTTGAGCTT
AGAAACTACA GCCATCCCAT GGAGCCTACG AACCTCGGTA ACGAGATCCC CAACGAGGTG
GTAGAAAGCC TGATGCGGGT CTCCGAGGAG AACTACCCGC TGGCGCAGGA GTATTTCCGT
CTCAAGGCGC AGCTTCTGGG CATCCCGCGC CTGAAGAACA CCGACGTCTA CGCCCCCATC
TCCGAGAGCG ACCGCAAGTA CAGCTTCGAG GAGGCGCGCG CCATGACGGT CGCTGCTTAC
CGCGGCTTCT CCGACGAGTT CGCAGAACTC GCCGATTCCT TCTTCACCGG CAAGAGGGTC
GACGTCCTCC CTCGCCCCGG CAAGAGCGGA GGCGCCTTCT GCATGGGGAT GATCCCGTCG
CTCCCCCCGT ACCTGCTTTT GAACTTCACC GGAAACCTGC GCGATGTATC CACCATGGCG
CACGAGGTGG GGCACGGCAT CCACTACCTT TTGGCGCAGC GCCAGAGCAT GCTCAACTAC
CATCCCCCGC TGCCGCTGGC CGAGACGGCC TCGGTCTTCG GGGAGATGCT GTTGACCCGT
CAGCTCCTGG AGCAGGAAAC CGACGTGGAG GTGAAGAAAT CGCTTCTCTG CGCGAAGATC
GAGGACATCA TCGCCACCAC CTTCCGCCAG AACGTCCTCA CCAGTTTCGA GGAACGGATG
CACCTGGAGC GGGCGAATGG GCTTCTGACC GCCAGCGAGC TCTGCGACAT GTGGTGGCAG
GAGAACGCGA AGCTCTACGG CGACGCCGTC GAGATGATAG AGCCGTACCG CTACGGCTGG
AGCTACATCT CCCACTTCAT TCACGCCCGT TTCTATTGCT ACTCCTACAC CTGCGCCGAG
TTGGTGGTGC TCTCCTTGTT CCAGCGCTAC CTGAAGGAGC GCGAGAGCTT CGTGCCGGTC
TACCGCGACA TCCTCGCCGA CGGCGGTTCC AAGTCCCCCG GCGACACCCT CGCCCCTGGA
GGGATCGTCT TCAGCGACCC GAGTTTCTGG CAGGGAGGGT ACGATCTGCT GGGCGACCTG
ATCAAGGAAC TGAAGGCGCT GCTGTAA
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| Protein sequence | MQSDLNWDTT PLYPAPSAPE LARAFEEGTG QVAAFRERYR GKVAELDAEG LLEALKQYES
LQEKLATPQL YAHLLFAADS ESDEHKRLSQ KAEEFGNAMG RELIFFDLEL IQMEEEPFAK
LADDLLLENY RHYLQVLRKF KKHTLTEREE SLLAQKSLTG VQAFCRLFDE VSASLRYTLE
MEGETREMTG EELLALLHHP DTGLRERAFG TFLKRHEENG IMFSAVFNNV ALDHSQELEL
RNYSHPMEPT NLGNEIPNEV VESLMRVSEE NYPLAQEYFR LKAQLLGIPR LKNTDVYAPI
SESDRKYSFE EARAMTVAAY RGFSDEFAEL ADSFFTGKRV DVLPRPGKSG GAFCMGMIPS
LPPYLLLNFT GNLRDVSTMA HEVGHGIHYL LAQRQSMLNY HPPLPLAETA SVFGEMLLTR
QLLEQETDVE VKKSLLCAKI EDIIATTFRQ NVLTSFEERM HLERANGLLT ASELCDMWWQ
ENAKLYGDAV EMIEPYRYGW SYISHFIHAR FYCYSYTCAE LVVLSLFQRY LKERESFVPV
YRDILADGGS KSPGDTLAPG GIVFSDPSFW QGGYDLLGDL IKELKALL
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