| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1279 |
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| Symbol | |
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| ID | 6781266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1476885 |
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| End bp | 1478606 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767273 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002138094 |
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| Protein GI | 197117667 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAC CTTTCCGAAA GAAAAGACTG GGCGACATCC TGCTGGAGCG GGGGGACCTG
ACTCAGGACC AGCTCGCCTA CGCGCTGGAC AAGCAGCATA GCACCAAGGA ACGACTGGGG
ATCATCTGCC TGGCCGACGG GCTGATCAGC GACATCGTGC TGGCCATGGC GCTCGCCGAG
CAGTTCGGCC TCGAGTACGT GGACCTGAAG GGGGTGCGCC CGGACGAGTC CCTGTTCAAC
TTCATCCCGC CCGAGGTCAC GTTCCGCTTC CACTTCGTGC CGCTGGATTT GCAGGGGGAC
CTGCTGGTGG TGGCCATCTC AGACCCCACC GCAGTGCTGC AGCTGGATGA GATGGCGCTC
CTTCTCGAGC GCCCGCTGCT TTTCAAGGTG GCCGCCGAAT CGGAAATCGC CTACCATCTG
AAACGGGGCG AGGGGACCAG CCGGGTGCTG AAGGAGGTCT CCGAGGACTT CATGCTGCAG
CTGGTGACCG AGACCGACAA AGGGGAGGAG ATTCTCTCCG TCGAGAACGT CACCGCGGAC
ACGAGCCCCA TCATCAAGCT GGTGAACTCC ACCATACTGG ATGCCCTCAC CAGGCGCGCC
TCCGATATTC ATATCGAGAC CGCGCAGGAC GGCGTCCTCA TCAAGTACCG CATCGACGGC
GTCCTCTACA AGGCCACCGA CCCCATCGAC TCCCATTTCC AGGGGCCGCT CATCTCCCGT
CTCAAGGTCA TGAGCGAACT GGACATCTCG GAGCGCCGCA TCCCGCAGGA CGGCCGCTTC
AAGGTCCGCA TCGGCTCCAA GTCCATCGAC TTCCGCGTCT CCATCATGCC TAGCGCCTTC
GGCGAGGACG CGGTCATCCG TATCCTCGAC AAGGAGAGCA TCGCCAGCGA CCTGCGGGGG
CTTACCCTGG AGACGCTGGG GATGGCGCCC CGCGAGATCA AGCGCTTCCG GAAGATGATC
AAGGAGCCCT ACGGCATGGT GCTGGTAACC GGGCCGACCG GTTCGGGCAA GACCACCACC
CTCTACGGAG CCTTGACCGA GATACATACC GGTCTGGAAA AGATCATCAC CATCGAGGAC
CCGGTCGAGT ACGTCCTCTC CGGCATCACC CAGATCCCAG TCAACGAGAA GAAGGGGCTC
ACCTTCGCCC GGGGCCTGCG CTCCGTCCTG CGCCACGACC CGGACAAGAT CATGGTGGGT
GAGATCCGCG ACTCGGAGAC GGCGCAGATC GCGGTGCAGT CGGCGCTCAC AGGCCACCTG
GTGTTCACCA CGGTGCACGC CAACAACGTC TTCGACGTCA TCGGCCGCTT CACCCACATG
GGAATCGACC CCTACAACTT CGTGGCCTGC CTTAACTGCG TCATGGCGCA ACGCCTGGTC
AGGAAGATCT GCCCCGCCTG CCGCAAGCCG GTGACGGTTA CCGACGACGA ACTGCGCGAG
TCGGCGATCG ACCCGGAAAG CACCCGCGGC CTGACCCTCT ACGAGGCCCG TGGATGCGAC
GAGTGCAACG GTACCGGCTA CCGCGGCCGC TCCGCCATCG TCGAGCTTTT GGACCTGAAC
GACGAGATCA GGGAACTGAT CATCGCCAAG TCACCGGTGG CCGCCCTCAA AAAGGCCGCC
AAGGCTGCAG GAACCATGTT CCTCCGGGAG AGCGCGGTAG CCAAGGTGCT GGCGGGCGAG
ACCACGATAA AGGAGATCAA CCGTGTCACT TTCGTGGAGT AG
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| Protein sequence | MLKPFRKKRL GDILLERGDL TQDQLAYALD KQHSTKERLG IICLADGLIS DIVLAMALAE
QFGLEYVDLK GVRPDESLFN FIPPEVTFRF HFVPLDLQGD LLVVAISDPT AVLQLDEMAL
LLERPLLFKV AAESEIAYHL KRGEGTSRVL KEVSEDFMLQ LVTETDKGEE ILSVENVTAD
TSPIIKLVNS TILDALTRRA SDIHIETAQD GVLIKYRIDG VLYKATDPID SHFQGPLISR
LKVMSELDIS ERRIPQDGRF KVRIGSKSID FRVSIMPSAF GEDAVIRILD KESIASDLRG
LTLETLGMAP REIKRFRKMI KEPYGMVLVT GPTGSGKTTT LYGALTEIHT GLEKIITIED
PVEYVLSGIT QIPVNEKKGL TFARGLRSVL RHDPDKIMVG EIRDSETAQI AVQSALTGHL
VFTTVHANNV FDVIGRFTHM GIDPYNFVAC LNCVMAQRLV RKICPACRKP VTVTDDELRE
SAIDPESTRG LTLYEARGCD ECNGTGYRGR SAIVELLDLN DEIRELIIAK SPVAALKKAA
KAAGTMFLRE SAVAKVLAGE TTIKEINRVT FVE
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