| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1278 |
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| Symbol | |
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| ID | 6781265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1475672 |
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| End bp | 1476877 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642767272 |
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| Product | type II secretion system protein |
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| Protein accession | YP_002138093 |
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| Protein GI | 197117666 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.588803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTCT TTACCTGTAA AATAGGCGCC TCCGACGGCA AGATCCTGGT CAAGGACCTC
GACGCGGTCA ACGCCGGCTT GCTCCGGCAG AGCCTGGAAG AGCAAGGGTA CGTCGTCTTC
GAGGTGCGCA AGAAGCCGTT CCAGTTCCTG CTGGAATCGG GGATCGGGCG CAAGAAGATC
GGCAACAAGG AGCTGCTGTT GTTCAACCAG GAACTCCTGG TACTGCTCAA GGCCGGACTC
CCCATCCTGC AGGCGCTCGA CACCATCCTG GAGTCGGGAG GGGGCAAGCT CAACGAGATA
CTGTCGGCGA TACGCGAGGA CGTGAAAGGT GGAATGGCGC TCTCCGCCGC CTTCGAGAAG
TTTCCGAGGG TGTTTCCCCA TCTCTACATC GCGTCGGTCC GGGCCGGGGA GAGGACCGGG
GACCTGCCGC AGACCATCCG CCGTTACATC GCCTTTCTCA AGAGAACCGA GGGGTTCCGC
GGCAAGGTCA TCGGCGCGCT TATCTACCCT GCCATCCTGG TCACGGTCGC GGCGGTGGCG
GTCTCTTTGT TGCTCATCTA CGTGGTGCCG ACCTTCAGTA CCATCTACGC GGATTCCGGC
GCCGCTTTGC CGCTCCCGAC CCAGATGCTG ATCAATTTCA CCGGGCTCTT GCGGCACTAC
CTGCCGCTAC TTCTGCTGCT GGGGGGCGTG GCGATCACCC TCTTCAAGCG CTGGAGCCAG
ACCGAATCCG GACGCTATAC GGTGGACGGC TTCAAGATCA AGACCCCGCT TCTGGGTGCC
GTCACCAGCC GTTACGCCCT TGCCGGCTTT ACCCGTACCC TGGCCACCGT GCTGGGCTCC
GGTATCCCCA TCGTCGAGGC GATGCGGATG TCGGTGGGGA CGCTCAACAA CAAGGTCCTG
GAGCGCGGCC TGCTCCTTGC AGTGCATCGC GTAGAGGAGG GGAGCAAGCT CTCCACCGCG
CTGGAAGGTA TGAAGCTGAT GCCCCCACTG GCGCTGCGCA TGCTCACCGT CGGCGAGACC
ACCGGCTCAT TGGAGGAGAT GCTATCGGAC ATCTCCGATT ACTTCGAAGA GGAGATCGAA
AGGGATCTCC ATGTACTGAC CACCTCGATC GAACCGGCGA TCATGGTGGC CATGGGTGTG
GTCATCGGGG TCATCATCGT CACCATGTAC CTGCCGATCT TCAAGATCGC CAGCACTGTC
GGCTAG
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| Protein sequence | MPVFTCKIGA SDGKILVKDL DAVNAGLLRQ SLEEQGYVVF EVRKKPFQFL LESGIGRKKI
GNKELLLFNQ ELLVLLKAGL PILQALDTIL ESGGGKLNEI LSAIREDVKG GMALSAAFEK
FPRVFPHLYI ASVRAGERTG DLPQTIRRYI AFLKRTEGFR GKVIGALIYP AILVTVAAVA
VSLLLIYVVP TFSTIYADSG AALPLPTQML INFTGLLRHY LPLLLLLGGV AITLFKRWSQ
TESGRYTVDG FKIKTPLLGA VTSRYALAGF TRTLATVLGS GIPIVEAMRM SVGTLNNKVL
ERGLLLAVHR VEEGSKLSTA LEGMKLMPPL ALRMLTVGET TGSLEEMLSD ISDYFEEEIE
RDLHVLTTSI EPAIMVAMGV VIGVIIVTMY LPIFKIASTV G
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