Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1273 |
Symbol | clpX |
ID | 6781257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1469986 |
End bp | 1471239 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642767264 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_002138088 |
Protein GI | 197117661 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.531349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGCAGAA GAGATGACCG TTCCGACACG CTGATCTGTT CCTTTTGCGG GAAGAGCCAG GAAGAGGTAA AGAAGTTGAT TGCGGGGCCT ACGGTCTACA TCTGCGACGA GTGCATCGAG CTTTGCAACG ACATCATCGC GGAGGAGTCC AAACTGGAGG ATGCCACCGC TACCGATGTG AGGAAACTTC CCAAGCCGCA GGAGATCAAG GAAGTCCTCG ATGAATACGT GATCGGCCAG TCCAGGGCGA AGAAGGTACT GGCTGTCGCC GTGTACAACC ATTACAAGAG GGTCGAGGCC GCGGTCAAGC CGGGCGACGT CGAGATGCAG AAGAGCAACA TCCTGCTTCT TGGCCCCACC GGCAGCGGCA AAACGCTCCT GGCGCAGACC CTGGCCCGCA TCCTCAAGGT GCCTTTCGCC ATGGCGGACG CCACCAACTT GACCGAGGCG GGTTACGTCG GCGAGGACGT GGAGAACATC ATCCTGACCC TTTTGCAGGC GTCCGACTAC GACGTGGAGA AGGCGCAGAA GGGGATCATC TACATCGACG AGATCGACAA GATCGCCAGG AAGTCCGACT CCCCCTCCAT CACCCGCGAC GTGTCGGGCG AGGGGGTGCA GCAGGCCCTT TTGAAGATCA TCGAAGGTAC CGTGGCGAGC GTACCCCCCA AGGGTGGCCG CAAGCACCCG CAGCAGGAAT TCCTCAAGGT GGACACCACC AACATCCTGT TCATCTGCGG CGGGGCCTTC CCCGGGTTGG ACAGCATCAT CCAGCAGAGG ATCGGGGTCA AGACGCTCGG CTTCGGCGCG GACGTCAAGA AGAAGGTGGA GAAGAAGGCG GGCGAACTGC TGGCCGGGGT GACCCCTGAG GATCTCCTCA AGTTCGGCTT CATCCCCGAG TTCGTGGGGC GCCTTCCCAT GCTCGCCTCG CTTTCCGAGC TCGACGAGGA GGCGATGGTC CAGATCCTCA AGGAGCCGAA GAACGCGCTG ATCAAGCAGT ACCAGAAGCT CTTCGATATG GAGCACGTGA AGCTGAAGTT CACCGACGGC TCCCTGGTCG CCATAGCCCG CGAGGCCCTG AAGAGAAAGA CCGGCGCCCG CGGCCTGCGC TCCATCCTCG AAAACGCCAT GCTGGACATC ATGTACGAGA TCCCTTCCCA GAGCATGGTG AAGGAAGTGG TCATCAACGA AGAGGTGATC TACAGCAAGG AAAAGCCGAT CATCGTCTAC GAGAACGTGG CGGAAAGCGC CTGA
|
Protein sequence | MSRRDDRSDT LICSFCGKSQ EEVKKLIAGP TVYICDECIE LCNDIIAEES KLEDATATDV RKLPKPQEIK EVLDEYVIGQ SRAKKVLAVA VYNHYKRVEA AVKPGDVEMQ KSNILLLGPT GSGKTLLAQT LARILKVPFA MADATNLTEA GYVGEDVENI ILTLLQASDY DVEKAQKGII YIDEIDKIAR KSDSPSITRD VSGEGVQQAL LKIIEGTVAS VPPKGGRKHP QQEFLKVDTT NILFICGGAF PGLDSIIQQR IGVKTLGFGA DVKKKVEKKA GELLAGVTPE DLLKFGFIPE FVGRLPMLAS LSELDEEAMV QILKEPKNAL IKQYQKLFDM EHVKLKFTDG SLVAIAREAL KRKTGARGLR SILENAMLDI MYEIPSQSMV KEVVINEEVI YSKEKPIIVY ENVAESA
|
| |