| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1272 |
|---|
| Symbol | clpP |
|---|
| ID | 6781256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1469390 |
|---|
| End bp | 1469989 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642767263 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_002138087 |
|---|
| Protein GI | 197117660 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGTAC CGATAGTAGT GGAGCAGACC GGCCGGGGCG AGAGGTCGTA CGACATCTAC
TCGCGCCTGC TGAAGGACAG GATCATCTTC CTGGGCGGCG GCATCGACGA TAACGTCGCG
AACCTGGTGA TAGCGCAGCT CCTCTTCCTC GAGGCCGAGG ACCCGGACAA GGATATCCAC
CTCTACATCA ACTCCCCCGG CGGCGTGGTT ACCGCCGGCA TGGCCATCTA CGACACCATG
CGCTACATCA AGGCGCCGGT CTCCACCATC TGCGTCGGGC AGGCCGCCTC CATGGGCGCG
TTCCTTCTGT CCGGCGGCGA GAAGGGGAAA CGGTACTCGC TGGTCAACTC GCGCATCATG
ATCCACCAGC CCCTGGGCGG TTTCCAGGGG CAGGCGACGG ACATCCATAT CCACGCCAAA
GAGATCCTGC GCATGAAGGA TCAACTGAAC GCGCTTCTGG CCGAGCACAC CGGCCAGAGC
GTGGAAAAGG TAGCGGCCGA TACCGAGCGC GACTACTTCA TGTCGGGCGA AGAGGCCAAG
AATTACGGCA TCATAGATGC CATTGTGACT AGAAACGTCG TCACCGGAGG TGCCAATTGA
|
|---|
| Protein sequence | MLVPIVVEQT GRGERSYDIY SRLLKDRIIF LGGGIDDNVA NLVIAQLLFL EAEDPDKDIH
LYINSPGGVV TAGMAIYDTM RYIKAPVSTI CVGQAASMGA FLLSGGEKGK RYSLVNSRIM
IHQPLGGFQG QATDIHIHAK EILRMKDQLN ALLAEHTGQS VEKVAADTER DYFMSGEEAK
NYGIIDAIVT RNVVTGGAN
|
|---|
| |