| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1266 |
|---|
| Symbol | |
|---|
| ID | 6781250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 1463723 |
|---|
| End bp | 1464277 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642767257 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002138081 |
|---|
| Protein GI | 197117654 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000976749 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACGA GCAGCCGACT CGCCATCTGG TGTCTCGCCC TGCTCCTCTC CATAACGCTC
TATGTAAAAG GCCGCTTTCC TGCCCCGAGG GGTGAGGAAG CGGCCTTTTT GTGTGCGCGG
GGCGAAAGTG TCACGGTGCG ACTGGCGGGA GGATTTCCCC GCGCCGGCGT GTATCGGTTT
CCCGACGGTA CCTCGGTGCG TAGCGCCATA AAAATGACGG TTACCGATAC GGAGCCTCTG
GGAGCGCTCC CGGCAGGGGG CGCGGCGCTG CTGCAAAACG GGGACGTCCT CAACCTTAGC
ATTCCCGACG GAAAAAACGC CGTGATTTCA ATCACAAAAA TGGGAGCTCA GGAAAGGATG
CTGCTGCAGG TGCCGCTGGA CCCGGACCGG ATGTCGGCGA AGGAATGGGC GCTGTTGCCG
GGGATAGGAC CTGTGCTTTC GGAACGGATC GTGGCGGAGC GTCACGAAAA TGGCGCTTTT
GGCTCCCTGG AGGGGGTGTT ACGGGTGCCG GGGATCGGGC CGGCAAAACT GGAGGCGATT
AAAAGATATT TCTAA
|
|---|
| Protein sequence | MPTSSRLAIW CLALLLSITL YVKGRFPAPR GEEAAFLCAR GESVTVRLAG GFPRAGVYRF
PDGTSVRSAI KMTVTDTEPL GALPAGGAAL LQNGDVLNLS IPDGKNAVIS ITKMGAQERM
LLQVPLDPDR MSAKEWALLP GIGPVLSERI VAERHENGAF GSLEGVLRVP GIGPAKLEAI
KRYF
|
|---|
| |