| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1265 |
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| Symbol | |
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| ID | 6781249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1462137 |
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| End bp | 1463723 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642767256 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_002138080 |
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| Protein GI | 197117653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000833314 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTGG TGAAACTGTA CGATACGACG CTTAGGGACG GAACGCAGGC AGAAGACATC
TCTTTCCTGG TGGAGGACAA GATCCGCATC GCCCATAAAC TGGACGAGAC GGGCATCGCT
TACATTGAAG GAGGGTGGCC CGGGAGCAAC CCCAAGGACG TCGCCTTCTT CAAGGACATC
AAGAAAGAGA AGCTCTCCCA GGCGAAGATC GCCGCTTTCG GCTCCACCAG GCGCGCCAAG
ATCACCCCGG ACAAGGATCA GAACATCCGC ACCCTGGTGC AGTCCGAGGC GGATGCGGTC
ACCATCTTCG GCAAGAGCTG GGACTTCCAG GTCCACGAGG CGCTCAGGAT CCCGCTTGAG
GAGAACCTGG AGCTGATCTT CGACTCGCTG GAGTACCTGA AGGCGCGCAT GCCTGAGGTG
TTCTACGACG CCGAGCACTT CTTCGACGGC TATAAGGCGA ATCCGGAGTA CGCGATCAAG
ACCCTGCTGG CGGCACAGCA GGCCGGCGCC GACTGCATCA TCCTCTGCGA CACCAACGGC
GGGACCATGC CCTTCGAGGT CGCCAGCATC GTGGCCGACG TGCAAAAGGC GATCACCACC
CCGCTCGGCA TCCATACCCA CAACGACGGC GAGTGCGCCG TCGCCAACTC GATAGTCGCT
GTGCAAAGCG GTATCGTCCA GGTGCAGGGG ACCATCAACG GCTTCGGCGA GCGCTGCGGC
AACGCGAACC TCTGCTCCGT CATCCCGGCC CTCAAGGTGA AGATGAAGAT GGAGTGCGTG
AGCGACCAGC AGATGCGCCA GTTGCGCGAC CTCTCCCGCT ACGTTTACGA ACTGGCGAAC
CTGGCGCCCG ACAAGCACCA GGCGTACGTC GGCAACTCCG CCTTCGCCCA TAAGGGGGGC
GTGCACGTCT CCGCCATCCA GCGCCACCCC GAGACCTACG AGCACATGAG GCCGGAGCTG
GTGGGAAATA CCACCAGGGT GCTGGTTTCC GACCTCTCCG GGCGCGCCAA CATCCTCGCC
AAGGCGACCG AGTTCAACAT CAACCTGGAC AGCAAGGATC CGGTGACCCT GGAGATCCTG
GAAGACATCA AGGCGATGGA GAACCGCGGC TATCAGTTCG AGGGGGCGGA GGCTTCCTTC
GAGCTCCTGA TGAAGCGCGC GCTCGGCACG CACCGCAAGT TCTTCTCCGT GATCGGCTTC
AGGGTCATCG ACGAGAAGCG CCACGAGGAC GAGCAGCCGA TCTCCGAGGC TACCATCAAG
GTGAAGGTGG GGGGAAAGAT CGAGCACACG GCGGCGGAAG GGTCCGGCCC GGTCAACGCG
CTGGACAACG CGCTCAGGAA GGCGCTGGAG AAGTTCTATC CCAAGCTTCG GGACGTGAAG
CTCCACGACT ACAAGGTAAG GGTGCTCCCG GCAGGGCAGG GGACGGCCTC CTCCATCCGG
GTGCTGATCG AATCCGGCGA TAAGGAAGGG CGCTGGGGCA CCGTCGGCGT TTCCTCCAAC
GTCATCGAGG CCTCCTACCA GGCCCTGATC GATGCCATTG AATTCAAGCT CCACAAGGAT
GAGGAGGCGG CAGCGCCGAG GCAGTGA
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| Protein sequence | MSLVKLYDTT LRDGTQAEDI SFLVEDKIRI AHKLDETGIA YIEGGWPGSN PKDVAFFKDI
KKEKLSQAKI AAFGSTRRAK ITPDKDQNIR TLVQSEADAV TIFGKSWDFQ VHEALRIPLE
ENLELIFDSL EYLKARMPEV FYDAEHFFDG YKANPEYAIK TLLAAQQAGA DCIILCDTNG
GTMPFEVASI VADVQKAITT PLGIHTHNDG ECAVANSIVA VQSGIVQVQG TINGFGERCG
NANLCSVIPA LKVKMKMECV SDQQMRQLRD LSRYVYELAN LAPDKHQAYV GNSAFAHKGG
VHVSAIQRHP ETYEHMRPEL VGNTTRVLVS DLSGRANILA KATEFNINLD SKDPVTLEIL
EDIKAMENRG YQFEGAEASF ELLMKRALGT HRKFFSVIGF RVIDEKRHED EQPISEATIK
VKVGGKIEHT AAEGSGPVNA LDNALRKALE KFYPKLRDVK LHDYKVRVLP AGQGTASSIR
VLIESGDKEG RWGTVGVSSN VIEASYQALI DAIEFKLHKD EEAAAPRQ
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