Gene Gbem_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1261 
Symbol 
ID6781245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1457956 
End bp1459500 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content68% 
IMG OID642767252 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_002138076 
Protein GI197117649 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.169741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGG TCACGGGACA GGTGATGCAG TCGATCGACA AAAGGGCCAT CGGGGAGTTC 
GGGATCCCGG GGCTTGCGCT CATGGAGCGC GCCGGCACCG CGTGCGCCGA CGCCATCTCC
GAGCGCTTCG GAGACGGCGT CGGGAAAAAG GCGGTCATCG TCGCCGGCAA AGGGAACAAC
GGCGGCGACG GTTTCGTCAT CTCCAGGATC CTCTCGCAGA GGGGGTGGGA GGCGCCGGTG
CTGCTACTTG CCTCGCCGGA AGCCGTGACC GGGGACGCCG CCGCCAACCT TAAGCGCCTT
GACCCAGGCG TGGTTACTAC GCTCCCCCAT GGGCTTTCCG GGCAGGAGCA TCTCCTCAAA
AGCGCCTCCG TCGTCGTCGA CGCGCTCCTT GGCACCGGCA TCAACAGCGA GGTGGGGGGG
ATCTACGGGG AGGCCATCGA CATCGTCAAC GCCTGCGGGG TCCCGGTGGT CGCGGTGGAC
CTCCCCTCCG GGATCGACGC CGGCAACGGC CAGGTGCTGG GGCGGGCGGT GCGCGCCGAA
TTAACGGTGA GCTTCGCCCT GGCGAAGCTT GGGAACGTGC TTTACCCGGG AGCGGAGTTC
GGCGGGCGTC TGGCAGTGGC GGATATCGGC ATGCCGCAGG CTGTAGTCGA CGAGGCGCCC
GGTTGCGAGT TCGTGGACGA AGAGAGCGCG CGGGGGATGA TCCGCAAAAG GAGCGTCCTC
GCCCACAAGG GGAGCAACGG GCATTGCCTC ATCATCGCCG GGAGCGCCGG GAAGACCGGT
GCCGCGGCCA TGGCCGCCCA AAGCGCCTTG AGGAGCGGGG CGGGGTTGGT GAGCCTCGCG
ATTCCCGCGG CGCTAAACCC CGTGCTGGAA TCGAAGACGA CCGAGGCGAT GACCATTGCC
GTCGGGCGGG AGGATAAGGG GTACTTCCTG GCGGGGGCGC TCGATGAACT CTTATCCGTC
GCCAAGGGGA AGGATGCGGT GGCGCTCGGC CCGGGGCTTG GGACCGCCCA CTCCACGGTT
TATCTGGTGC ACTCGCTCCT CGCCCTCCTG GAGGCGCCGC TTGTCATCGA CGCCGACGGG
CTGAACGCGG TGGCGGCGGC ACCTGAGCTT CTCTTGCAAA GGAGGGGGAG GGTGACGCTT
TTGACGCCGC ACCCCGGGGA GATGGCCAGG CTTTCCGGGC TCTCGATCCC GCAGGTCGAG
GCGGACCGCA TCGGCTGCGC CCGCGACTTC GCCGCGCGCT TCCAGGTCTA CCTCGTCCTC
AAGGGGGCCC GCAGCATCGT GGCGGCGCCC GACGGCGGCG TCAGTATCAA CGGCAGCGGC
AACCCGGGCA TGGCGACCGG GGGGATGGGG GACGTCCTGA CCGGCGTCAT CGCCGCCCTT
TTGGGCCAGG GGTACCACCC CTTTGCCGCC GCCCGCTTAG GGACTTTCCT CCACGGCTAC
GCGGCGGACT GCCTGGTTGA GGAAATGGGT ACGCGCGGCA TGGTCGCAAC CGACGTGCAG
GAGGCCCTCC CCAGGGCGCT GCAGCGGCTT ATGGCCGCAA CATGA
 
Protein sequence
MKVVTGQVMQ SIDKRAIGEF GIPGLALMER AGTACADAIS ERFGDGVGKK AVIVAGKGNN 
GGDGFVISRI LSQRGWEAPV LLLASPEAVT GDAAANLKRL DPGVVTTLPH GLSGQEHLLK
SASVVVDALL GTGINSEVGG IYGEAIDIVN ACGVPVVAVD LPSGIDAGNG QVLGRAVRAE
LTVSFALAKL GNVLYPGAEF GGRLAVADIG MPQAVVDEAP GCEFVDEESA RGMIRKRSVL
AHKGSNGHCL IIAGSAGKTG AAAMAAQSAL RSGAGLVSLA IPAALNPVLE SKTTEAMTIA
VGREDKGYFL AGALDELLSV AKGKDAVALG PGLGTAHSTV YLVHSLLALL EAPLVIDADG
LNAVAAAPEL LLQRRGRVTL LTPHPGEMAR LSGLSIPQVE ADRIGCARDF AARFQVYLVL
KGARSIVAAP DGGVSINGSG NPGMATGGMG DVLTGVIAAL LGQGYHPFAA ARLGTFLHGY
AADCLVEEMG TRGMVATDVQ EALPRALQRL MAAT