Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1240 |
Symbol | |
ID | 6781224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1436878 |
End bp | 1438182 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642767231 |
Product | OmpA/MotB domain protein |
Protein accession | YP_002138055 |
Protein GI | 197117628 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000641372 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TTGTTTCATC GATGCTAACC TGTGCTGCTG TACTTACCAT GGCAACTACA GCTGTTGCCG GAGAAAGAGA GGGGGCATTT TCAATTTCTC CTTTTGTCGG CGGTTATACG TTCGATGGGG AGCAGCACTT GGAAACGGCA CCTGTGTTTG GGCTGCGCCT GGGCTATGAC CTGACAAAGA ACTGGGAAGT CGAAGCTGTT GCTGATTACT TAGCGACCGA AGGGACACGT AATGACAGAA GTGTCAATGC CTTGTCCTAT CGACTGGACG TCCTCTACAA CTTTTTGCCG GATGGACCGC TGGTACCGTA CCTTGCAGTG GGAGGTGGCG GGATTACCTA CGGTCACGGC CGCGATGGGC TTGAAGTCAG TGACAGAACT ACTGACGCAA CCATCAATGC CGGTGGGGGC ATCAAGTACT TTGTTACCGA CTCGGTCGCG TTGCGGGCTG ACGCTCGCCA GCTGTTCGTA TTGGAAAGTC CGGACAAGCC TAAATACAAC TGGGAGTACA CCGCCGGCCT GACCTTCCTG TTTGGCGACA AGGCAGCTCC GGCACCGGTA AAGGCTCCGG CACCTGCACC TGCACCAAAG CCGGTTGTTG AACCCGTTCC TGTGCAAAAG CCTGTTCCGG CTCCTGTAGT AGCTCCTGTG CCGCCTCCCG CCCCCCCCGC TCCTTCTGCA GACATGACGG TTACACCGGG TTCGATTACC AAAGGCGAAG CCGCCATTTT GACTTGGAAG TCGAGCAACG CCACCAATTG TGAAATTCAG CCGGAAGTTG GCTCTGTTAA GCCTCAGGGT ACCGTCAAGG TTGTCCCTGC TGACAATACT GAGTACACCA TAACCTGCAA TGGCGCCGGT GGCACCGCTA ATAGTGCAGC CAAAGTCGCG GTGATTGCTC CTGCTCCAGT AGTGGTTGCG CCCCCTGCTC CTGCTCCGAA GCTGTGCAGC CCTGCTGTCA TAAACATCCA GTTCGATACC AACAAGGCCG ACCTCAAGCC CCAGTATCGC CCTGAATTGA AAGCTTTAGC TGACTTCTTG AACGAGTTCC CCAATGCCAC TGGTGTCATT GAGGGGCATA CCGACAACGT TGGACCGAAA GCTCTTAATA TGAAACTGTC TCAATCGCGT GCAGATACGA TCCGTAATTC TCTTATCAAA GAATTCGGGA TCGCACCTGA GCGGATTAAA GCAGTAGGCT ATGGTCCTAC AAAGCCCGTT GCCAGCAACA AGGATAAAGC GGGGAAAGCA AAGAATCGGC GTATCGAATC CAACTTTAAC TGCAACAACA AGTAG
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Protein sequence | MKKIVSSMLT CAAVLTMATT AVAGEREGAF SISPFVGGYT FDGEQHLETA PVFGLRLGYD LTKNWEVEAV ADYLATEGTR NDRSVNALSY RLDVLYNFLP DGPLVPYLAV GGGGITYGHG RDGLEVSDRT TDATINAGGG IKYFVTDSVA LRADARQLFV LESPDKPKYN WEYTAGLTFL FGDKAAPAPV KAPAPAPAPK PVVEPVPVQK PVPAPVVAPV PPPAPPAPSA DMTVTPGSIT KGEAAILTWK SSNATNCEIQ PEVGSVKPQG TVKVVPADNT EYTITCNGAG GTANSAAKVA VIAPAPVVVA PPAPAPKLCS PAVINIQFDT NKADLKPQYR PELKALADFL NEFPNATGVI EGHTDNVGPK ALNMKLSQSR ADTIRNSLIK EFGIAPERIK AVGYGPTKPV ASNKDKAGKA KNRRIESNFN CNNK
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