| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1227 |
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| Symbol | |
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| ID | 6781211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1421249 |
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| End bp | 1424938 |
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| Gene Length | 3690 bp |
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| Protein Length | 1229 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642767218 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002138042 |
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| Protein GI | 197117615 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATT TGAGCCTCAC GACGAAGATG AGCGCCATGG TTTCGCTTTT GGTGGCTCTG
ATCCTCTCTT TGCTGACCCT TGGCGCCTGC TGGTACCTCG AACAACAGTT CCGGACGACC
ATTTTCGGCC AGCAGTTCAG CATGGTCTCC ACCATCGCCG GGGAGATCGA CGCCAGGATC
CACAGCACCC AAAAGCAGCT GGAAGCCCTC GCCGGAACCA TCAAACCCGA AGTCCTCAAT
GAGCCGCACA AGGCCCAGGA GTTTCTGCAG CAGCACCCTG AAGCCCTCGC CGTCTTCGAC
AGCGGTCTGT TGCTCTTCTC CCGTGAGGGA GTCTTGCTGG CGATCAACCC CATGGAGCGG
GATATGATCG GCAGGGACTA CTCCTTCCGC GAGTATTATC AAAAGGCGCT GCAGACCAAA
AAGACCGTCA TCTCCGAACC CTTCATCACC ACCCAGCATC ATGGCCACCC CACTGTCGCC
GTCGTCGTCC CCCTGTTGGA CTCCCGCGGC AGGCTCTACG GCCTGATCGG CGGCATGATC
GACCTTCTCT CCGACAACTA CCTGGGAAAA TTGGCCGGGG TGCGCATCGG CAAGGAGGGG
AACCTCTATC TCTTCAACAG CCAGCGCACC ATGATCGTCC ACCCCGACCG CGCCCGAATC
ATGAAGCAGG ACATACCGCC CGGGGCGAAC CGCCTCCTGG ACCGGGCGCT GCTCGGCTTC
GAAGGGGCGG GGGACACCAT CACCTCCCGC GGGGTCCCCT CGCTCAGTTC CTTCAAGCGC
TTGAATTCCA CCGGGTGGAT CCTCGGGGCA AACTTCCCGC AACGGGAGGC GTACGCTCCG
CTTAGGGAAG CGAAGACGCT CCTGGCGGTG GCGCTTTTCA TCTCACTTTG CGGAACCGTC
CTCGTCACCC ACCTCTTCAT GCGCCGCCTC ACGTCGCCCT TATTGACCTT CATCGGACAC
GTGCAGGGAA TGGGGGACCA GGAGCGCGAG CTGGAACCGG TGGCTATCAG CACCGGCGAC
GAGATCGGCA CCCTGGCGCT TGCCTTCAAC CGCATGGTGC AGGAGCTTCA AAGGCAGAGG
ACGGCCGCGC GCGAACTGCG GCTGGCCATA GATCAGGCCC CGGTGACGGT GATGATCACC
GACCCGCAGG GGGGGATCGA GTACGTGAAC CCGAACTTCA CCAAGGTGAC CGGGTACCAG
CCGGAGGATG CGCTGGGGAG GGACCCGAGG GAGATAATCG GCACGGGGTG CTATCCGGAG
GAATTCTACG AGGAGCTCTG GGGCACGTTG CGCTCGGGGA AGGAATGGCA TGGGGAGATC
CGCAACAAGA GGAAAAGCGG CGAACTCTAC TGGGAGAGCG TCTCCATCTC GCCCGTGAAA
TCGCCCCGCG GCGAAATCAA CAACTTCGTC GGGGTCATGG AAGACATCAC GCAGAGAAAG
CGTGCCGAGG AAGCGCTGAT CCGGAGCGAC GAGCAGATCC GCCTGCTTTT GGAATCGACG
GCGGAGGCGA TCTTCGGAAT CGATCTCATG GGCAACTGCA CCTTCGCCAA CCCCTCCTGC
GCGAGGCTCC TGGGCCACGC GGATCCGGAC CAACTGCTGG GGAAGAACAT GCATCTGCTG
ATGCACCACA CCACCTCCGA GGGGAAGCCC AACCCGGTGC AGGAGTGCGC CGCCTACCAG
GTGCTCCGGG GAGGCGAAGG GGTGCACAAG GATGACGACG TATTCTGGCG ACGCGACGGC
TCCTCTTTCG CGGTCGAGTA CTGGTCCTAC CCGCAGCTGC ACGACGGGGA ACTGGTGGGG
GGGGTGGTGA CCTTCTTCGA CATCAGCGAA AGAAAGCGGG CTGAGGCCGA ACTGATCCGG
GCCACCGAGG CCGCCGAGGC CGCCACACGC GCGAAGAGCG AGTTTTTGGC CAACATGAGC
CACGAGATCA GGACGCCGAT GAACGCCGCG CTCGGCATGC TCTACCTGTT GCAGCACACG
GAGTTGTCCG AGACGCAAAA GAGCTATCTG GAGAAGGCGC AGACGGCGTC CGGGGTGCTG
CTCGGGGTAA TCAACGACAT CCTCGATTTC TCCAAGGTGG AGGCGGGGAG GATGGTGCTG
GAAACCACCC CCTTCCGCAT GGCGGCGGTC CTCTCCGACC TGCAGACGGT GGCGCAGGCG
ACACTCAGGG AGAAGCCGAT CGAGTTCGTT ACCAGGTGCG GCGCGGATAT CCCGGAGCAG
CTCTTCGGGG ATCCGCTGCG GCTCGGACAG GTGCTCTTGA ACCTCGCCAG CAACGCGATC
AAGTTCACCG AGAAGGGGAA GGTCGAGGTC GAGGTGGCGC TCCTTGCGCA GGAGCAAGGG
GAGGTAACGC TCCGCTTTTC CGTCGCCGAC ACCGGGATCG GCATGACCAC GGAGCAGCAG
GAATCCGTCT TCACCCCCTT CACCCAGGCG GACAGCTCCA CCACCCGCAA GTACGGCGGA
ACCGGCTTGG GGCTTGCCAT CAGCCGCGAG CTGGTGCAGC TGATGGGGGG GCGGATGTGG
GTGGTGAGCG AGCCGGGGCG CGGCAGCACC TTCAGCTTCA TCGCCCACTT AGCCCTCCCC
GCGGCATCGG GGGCGCAGGC GGCGCCGGGG GGGGAGGGAC CGGAACCGGA TAGCGATACG
CAGCCGGCTC TGACCGGTGT GCGGGTCCTG GTCGTCGAGG ACAACCTGAT CAACCAGGAG
GTGGCCAGGC TGATCCTGGA GAAGGGGGGG ATCAAGGTGG ACGTGGCACG CAACGGCGCC
GAGGCGCTCT CGCTGGTGCA CCTGCCGCAG GCTTGCTACC GCGCGGTGCT CATGGACGTG
CACATGCCGG TCATGGACGG CCTGGAGGCG ACCCGGCGCA TACGGCTCGA TCCCGCCCTG
GCGCGGCTTC CCATCATCGC CATGACGGCG AGCGTCTTCA GCGAGGAGCG GCGGCTCTGC
CTGGAGGCGG GGATGAACGA TCAGGTGAGC AAGCCTATCG ACGTGCCGCA GCTTTTCGCC
ACTCTCAGGC GCTGGATCGG GCCTATGGAG CTGACCGTCG AGCCCGACCC GCTGCAGGCG
GACTGGCACC GGACCGGCTT CCCCGAGCAG ATGCCGGGGC TGGATCTGAA GCGGGCGTTG
CGGACGCTGG AGGGGACGCC GCAGCTGATG CGGCTTCTGG CTCGGTTCCG GCTGGAGAAC
GAGCCGCTCA TGGCACAGCT GGGCGAGGCA GCCGCGAAAG GGGAGCTGCA GCTGGCCAAG
CGCCTGATCC ACACGGTGAA GGGGTCCGGC GGCAACCTGG GGGCCACCAG GCTCTGCAGC
GCTGCCGCCT CCCTGGAGAT GGCGCTCAAT GGCGACGACG CCTCGCTCTT GCACCAGACG
CTGGAGAATT TCCACGAGAA ACTCCACGAG GTCCTAGACT CGATACGCCT CCTGGAAGAG
CAATACGGCG GGGCCGTCGG GACGGCATCC GGGGGCGGGG AGACGATCAA GGTCTGCGCC
CAGGACCTGG AACACGTAGC GGCCCTGGCG CGGGCGTTGA AGCGCCTTTT GGAGGACCAG
AACATGAACG CGCTCGGCCT TTGGGAAGAG ATGAGGCCGC TTGTAACCGG AGAACTCGCG
GACCGGCTCG AAGCGACGCT GCAGTCGCTC GATTTCGGCG ATGCCGGCAC CATCCTGCGG
GACATCATGC AAAACCTGGA GATATCGTAA
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| Protein sequence | MKNLSLTTKM SAMVSLLVAL ILSLLTLGAC WYLEQQFRTT IFGQQFSMVS TIAGEIDARI
HSTQKQLEAL AGTIKPEVLN EPHKAQEFLQ QHPEALAVFD SGLLLFSREG VLLAINPMER
DMIGRDYSFR EYYQKALQTK KTVISEPFIT TQHHGHPTVA VVVPLLDSRG RLYGLIGGMI
DLLSDNYLGK LAGVRIGKEG NLYLFNSQRT MIVHPDRARI MKQDIPPGAN RLLDRALLGF
EGAGDTITSR GVPSLSSFKR LNSTGWILGA NFPQREAYAP LREAKTLLAV ALFISLCGTV
LVTHLFMRRL TSPLLTFIGH VQGMGDQERE LEPVAISTGD EIGTLALAFN RMVQELQRQR
TAARELRLAI DQAPVTVMIT DPQGGIEYVN PNFTKVTGYQ PEDALGRDPR EIIGTGCYPE
EFYEELWGTL RSGKEWHGEI RNKRKSGELY WESVSISPVK SPRGEINNFV GVMEDITQRK
RAEEALIRSD EQIRLLLEST AEAIFGIDLM GNCTFANPSC ARLLGHADPD QLLGKNMHLL
MHHTTSEGKP NPVQECAAYQ VLRGGEGVHK DDDVFWRRDG SSFAVEYWSY PQLHDGELVG
GVVTFFDISE RKRAEAELIR ATEAAEAATR AKSEFLANMS HEIRTPMNAA LGMLYLLQHT
ELSETQKSYL EKAQTASGVL LGVINDILDF SKVEAGRMVL ETTPFRMAAV LSDLQTVAQA
TLREKPIEFV TRCGADIPEQ LFGDPLRLGQ VLLNLASNAI KFTEKGKVEV EVALLAQEQG
EVTLRFSVAD TGIGMTTEQQ ESVFTPFTQA DSSTTRKYGG TGLGLAISRE LVQLMGGRMW
VVSEPGRGST FSFIAHLALP AASGAQAAPG GEGPEPDSDT QPALTGVRVL VVEDNLINQE
VARLILEKGG IKVDVARNGA EALSLVHLPQ ACYRAVLMDV HMPVMDGLEA TRRIRLDPAL
ARLPIIAMTA SVFSEERRLC LEAGMNDQVS KPIDVPQLFA TLRRWIGPME LTVEPDPLQA
DWHRTGFPEQ MPGLDLKRAL RTLEGTPQLM RLLARFRLEN EPLMAQLGEA AAKGELQLAK
RLIHTVKGSG GNLGATRLCS AAASLEMALN GDDASLLHQT LENFHEKLHE VLDSIRLLEE
QYGGAVGTAS GGGETIKVCA QDLEHVAALA RALKRLLEDQ NMNALGLWEE MRPLVTGELA
DRLEATLQSL DFGDAGTILR DIMQNLEIS
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